Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BC035044E0CXF8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BC035044E0CXF8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BC035044E0CXF8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BC035044E0CXF8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BC035044E0CXF8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BC035044E0CXF8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BC035044E0CXF8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
BC035044E0CXF8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BC035044E0CXF8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BC035044E0CXF8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
BC035044E0CXF8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.71■□□□□ 0.59
BC035044E0CXF8 Gm45364-201ENSMUST00000210883 159 ntBASIC18.71■□□□□ 0.59
BC035044E0CXF8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BC035044E0CXF8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BC035044E0CXF8 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.71■□□□□ 0.59
BC035044E0CXF8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BC035044E0CXF8 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.7■□□□□ 0.58
BC035044E0CXF8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BC035044E0CXF8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
BC035044E0CXF8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BC035044E0CXF8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BC035044E0CXF8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BC035044E0CXF8 Mir3960-201ENSMUST00000198213 73 ntBASIC18.69■□□□□ 0.58
BC035044E0CXF8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.69■□□□□ 0.58
BC035044E0CXF8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BC035044E0CXF8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BC035044E0CXF8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BC035044E0CXF8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BC035044E0CXF8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BC035044E0CXF8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BC035044E0CXF8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BC035044E0CXF8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BC035044E0CXF8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BC035044E0CXF8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BC035044E0CXF8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BC035044E0CXF8 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.67■□□□□ 0.58
BC035044E0CXF8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.67■□□□□ 0.58
BC035044E0CXF8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BC035044E0CXF8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.66■□□□□ 0.58
BC035044E0CXF8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BC035044E0CXF8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
BC035044E0CXF8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BC035044E0CXF8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BC035044E0CXF8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BC035044E0CXF8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BC035044E0CXF8 Terc-201ENSMUST00000082862 423 ntBASIC18.65■□□□□ 0.58
BC035044E0CXF8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BC035044E0CXF8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BC035044E0CXF8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BC035044E0CXF8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC035044E0CXF8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BC035044E0CXF8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC035044E0CXF8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BC035044E0CXF8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC035044E0CXF8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BC035044E0CXF8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC035044E0CXF8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC035044E0CXF8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC035044E0CXF8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC035044E0CXF8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BC035044E0CXF8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BC035044E0CXF8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BC035044E0CXF8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC035044E0CXF8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BC035044E0CXF8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.62■□□□□ 0.57
BC035044E0CXF8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BC035044E0CXF8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC035044E0CXF8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BC035044E0CXF8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BC035044E0CXF8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BC035044E0CXF8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC035044E0CXF8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC035044E0CXF8 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.61■□□□□ 0.57
BC035044E0CXF8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BC035044E0CXF8 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.61■□□□□ 0.57
BC035044E0CXF8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BC035044E0CXF8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
BC035044E0CXF8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC035044E0CXF8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BC035044E0CXF8 Gm22567-201ENSMUST00000175542 342 ntBASIC18.6■□□□□ 0.57
BC035044E0CXF8 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.6■□□□□ 0.57
BC035044E0CXF8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC035044E0CXF8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BC035044E0CXF8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BC035044E0CXF8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BC035044E0CXF8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC035044E0CXF8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC035044E0CXF8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC035044E0CXF8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.59■□□□□ 0.57
BC035044E0CXF8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.59■□□□□ 0.57
BC035044E0CXF8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC035044E0CXF8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC035044E0CXF8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BC035044E0CXF8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.58■□□□□ 0.57
BC035044E0CXF8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BC035044E0CXF8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BC035044E0CXF8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BC035044E0CXF8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BC035044E0CXF8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms