Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.86■□□□□ 0.45
Nkx6-2D3Z4R4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-2D3Z4R4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-2D3Z4R4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nkx6-2D3Z4R4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx6-2D3Z4R4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx6-2D3Z4R4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx6-2D3Z4R4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx6-2D3Z4R4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx6-2D3Z4R4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx6-2D3Z4R4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx6-2D3Z4R4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-2D3Z4R4 Peli2-204ENSMUST00000226513 1320 ntBASIC17.82■□□□□ 0.44
Nkx6-2D3Z4R4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx6-2D3Z4R4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-2D3Z4R4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nkx6-2D3Z4R4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-2D3Z4R4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-2D3Z4R4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-2D3Z4R4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nkx6-2D3Z4R4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-2D3Z4R4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-2D3Z4R4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-2D3Z4R4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-2D3Z4R4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-2D3Z4R4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-2D3Z4R4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nkx6-2D3Z4R4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-2D3Z4R4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-2D3Z4R4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-2D3Z4R4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-2D3Z4R4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-2D3Z4R4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx6-2D3Z4R4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx6-2D3Z4R4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx6-2D3Z4R4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nkx6-2D3Z4R4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nkx6-2D3Z4R4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nkx6-2D3Z4R4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx6-2D3Z4R4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.77■□□□□ 0.43
Nkx6-2D3Z4R4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx6-2D3Z4R4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-2D3Z4R4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nkx6-2D3Z4R4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nkx6-2D3Z4R4 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.75■□□□□ 0.43
Nkx6-2D3Z4R4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx6-2D3Z4R4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.75■□□□□ 0.43
Nkx6-2D3Z4R4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx6-2D3Z4R4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nkx6-2D3Z4R4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx6-2D3Z4R4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx6-2D3Z4R4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx6-2D3Z4R4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nkx6-2D3Z4R4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx6-2D3Z4R4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx6-2D3Z4R4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx6-2D3Z4R4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx6-2D3Z4R4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx6-2D3Z4R4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx6-2D3Z4R4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx6-2D3Z4R4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.72■□□□□ 0.43
Nkx6-2D3Z4R4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx6-2D3Z4R4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nkx6-2D3Z4R4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nkx6-2D3Z4R4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx6-2D3Z4R4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nkx6-2D3Z4R4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx6-2D3Z4R4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkx6-2D3Z4R4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nkx6-2D3Z4R4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nkx6-2D3Z4R4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Nkx6-2D3Z4R4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx6-2D3Z4R4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx6-2D3Z4R4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx6-2D3Z4R4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms