Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a4A2AX52 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col6a4A2AX52 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a4A2AX52 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.61■□□□□ 0.57
Col6a4A2AX52 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Col6a4A2AX52 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col6a4A2AX52 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a4A2AX52 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col6a4A2AX52 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.6■□□□□ 0.57
Col6a4A2AX52 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a4A2AX52 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a4A2AX52 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a4A2AX52 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.58■□□□□ 0.57
Col6a4A2AX52 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col6a4A2AX52 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col6a4A2AX52 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col6a4A2AX52 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col6a4A2AX52 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.58■□□□□ 0.56
Col6a4A2AX52 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col6a4A2AX52 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a4A2AX52 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a4A2AX52 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a4A2AX52 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a4A2AX52 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a4A2AX52 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a4A2AX52 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.56■□□□□ 0.56
Col6a4A2AX52 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a4A2AX52 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.56■□□□□ 0.56
Col6a4A2AX52 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a4A2AX52 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a4A2AX52 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.55■□□□□ 0.56
Col6a4A2AX52 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.55■□□□□ 0.56
Col6a4A2AX52 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col6a4A2AX52 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col6a4A2AX52 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.54■□□□□ 0.56
Col6a4A2AX52 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.54■□□□□ 0.56
Col6a4A2AX52 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a4A2AX52 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a4A2AX52 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.53■□□□□ 0.56
Col6a4A2AX52 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Col6a4A2AX52 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a4A2AX52 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a4A2AX52 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col6a4A2AX52 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a4A2AX52 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Col6a4A2AX52 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a4A2AX52 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col6a4A2AX52 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.51■□□□□ 0.55
Col6a4A2AX52 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.51■□□□□ 0.55
Col6a4A2AX52 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a4A2AX52 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a4A2AX52 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.5■□□□□ 0.55
Col6a4A2AX52 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col6a4A2AX52 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.5■□□□□ 0.55
Col6a4A2AX52 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Col6a4A2AX52 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.5■□□□□ 0.55
Col6a4A2AX52 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a4A2AX52 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a4A2AX52 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a4A2AX52 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col6a4A2AX52 Gm22238-201ENSMUST00000175222 88 ntBASIC18.49■□□□□ 0.55
Col6a4A2AX52 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a4A2AX52 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a4A2AX52 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.49■□□□□ 0.55
Col6a4A2AX52 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col6a4A2AX52 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a4A2AX52 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col6a4A2AX52 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.48■□□□□ 0.55
Col6a4A2AX52 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.48■□□□□ 0.55
Col6a4A2AX52 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.47■□□□□ 0.55
Col6a4A2AX52 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.47■□□□□ 0.55
Col6a4A2AX52 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col6a4A2AX52 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col6a4A2AX52 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.47■□□□□ 0.55
Col6a4A2AX52 Gm27454-201ENSMUST00000185090 204 ntBASIC18.46■□□□□ 0.55
Col6a4A2AX52 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.46■□□□□ 0.55
Col6a4A2AX52 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col6a4A2AX52 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col6a4A2AX52 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col6a4A2AX52 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col6a4A2AX52 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col6a4A2AX52 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col6a4A2AX52 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a4A2AX52 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a4A2AX52 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col6a4A2AX52 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a4A2AX52 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a4A2AX52 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.45■□□□□ 0.54
Col6a4A2AX52 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.44■□□□□ 0.54
Col6a4A2AX52 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.44■□□□□ 0.54
Col6a4A2AX52 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a4A2AX52 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col6a4A2AX52 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a4A2AX52 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a4A2AX52 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a4A2AX52 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a4A2AX52 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.43■□□□□ 0.54
Col6a4A2AX52 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a4A2AX52 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a4A2AX52 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms