Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5089A1L3C8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5089A1L3C8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5089A1L3C8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm5089A1L3C8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5089A1L3C8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.7■□□□□ 0.42
Gm5089A1L3C8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5089A1L3C8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5089A1L3C8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Gm5089A1L3C8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.7■□□□□ 0.42
Gm5089A1L3C8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5089A1L3C8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5089A1L3C8 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.69■□□□□ 0.42
Gm5089A1L3C8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5089A1L3C8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5089A1L3C8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.69■□□□□ 0.42
Gm5089A1L3C8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5089A1L3C8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm5089A1L3C8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5089A1L3C8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5089A1L3C8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5089A1L3C8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.68■□□□□ 0.42
Gm5089A1L3C8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5089A1L3C8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5089A1L3C8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Gm5089A1L3C8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5089A1L3C8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5089A1L3C8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5089A1L3C8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Gm7417-201ENSMUST00000192950 473 ntBASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5089A1L3C8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.66■□□□□ 0.42
Gm5089A1L3C8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5089A1L3C8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5089A1L3C8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.65■□□□□ 0.42
Gm5089A1L3C8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm5089A1L3C8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm5089A1L3C8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5089A1L3C8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5089A1L3C8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm5089A1L3C8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm5089A1L3C8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5089A1L3C8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm5089A1L3C8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5089A1L3C8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5089A1L3C8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5089A1L3C8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm5089A1L3C8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5089A1L3C8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5089A1L3C8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5089A1L3C8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5089A1L3C8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5089A1L3C8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Gm5089A1L3C8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5089A1L3C8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5089A1L3C8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5089A1L3C8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5089A1L3C8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5089A1L3C8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5089A1L3C8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm5089A1L3C8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5089A1L3C8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5089A1L3C8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5089A1L3C8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5089A1L3C8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5089A1L3C8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5089A1L3C8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5089A1L3C8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5089A1L3C8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gm5089A1L3C8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5089A1L3C8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm5089A1L3C8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5089A1L3C8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm5089A1L3C8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms