Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28729A0A1B0GSW2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28729A0A1B0GSW2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28729A0A1B0GSW2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28729A0A1B0GSW2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm28729A0A1B0GSW2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Gm10232-201ENSMUST00000089221 720 ntBASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28729A0A1B0GSW2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm28729A0A1B0GSW2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28729A0A1B0GSW2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.68■■□□□ 1.06
Gm28729A0A1B0GSW2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28729A0A1B0GSW2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm28729A0A1B0GSW2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gm28729A0A1B0GSW2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm28729A0A1B0GSW2 Gm15039-201ENSMUST00000118914 875 ntBASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm28729A0A1B0GSW2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm28729A0A1B0GSW2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm28729A0A1B0GSW2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Gm28729A0A1B0GSW2 Etf1-202ENSMUST00000180351 108 ntBASIC21.61■■□□□ 1.05
Gm28729A0A1B0GSW2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm28729A0A1B0GSW2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm28729A0A1B0GSW2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm28729A0A1B0GSW2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28729A0A1B0GSW2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm28729A0A1B0GSW2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28729A0A1B0GSW2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28729A0A1B0GSW2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm28729A0A1B0GSW2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Gm28729A0A1B0GSW2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms