Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav23A0A0G2JG17 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav23A0A0G2JG17 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav23A0A0G2JG17 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav23A0A0G2JG17 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Notumos-201ENSMUST00000151998 2659 ntBASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav23A0A0G2JG17 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav23A0A0G2JG17 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav23A0A0G2JG17 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav23A0A0G2JG17 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav23A0A0G2JG17 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav23A0A0G2JG17 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav23A0A0G2JG17 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav23A0A0G2JG17 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav23A0A0G2JG17 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav23A0A0G2JG17 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav23A0A0G2JG17 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav23A0A0G2JG17 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav23A0A0G2JG17 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav23A0A0G2JG17 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav23A0A0G2JG17 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav23A0A0G2JG17 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav23A0A0G2JG17 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav23A0A0G2JG17 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav23A0A0G2JG17 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav23A0A0G2JG17 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.76■□□□□ 0.43
Trav23A0A0G2JG17 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav23A0A0G2JG17 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.74■□□□□ 0.43
Trav23A0A0G2JG17 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav23A0A0G2JG17 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav23A0A0G2JG17 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav23A0A0G2JG17 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav23A0A0G2JG17 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav23A0A0G2JG17 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav23A0A0G2JG17 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.73■□□□□ 0.43
Trav23A0A0G2JG17 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav23A0A0G2JG17 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav23A0A0G2JG17 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav23A0A0G2JG17 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav23A0A0G2JG17 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav23A0A0G2JG17 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav23A0A0G2JG17 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav23A0A0G2JG17 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav23A0A0G2JG17 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav23A0A0G2JG17 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trav23A0A0G2JG17 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav23A0A0G2JG17 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav23A0A0G2JG17 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms