Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv30A0A0B4J1P1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv30A0A0B4J1P1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Trbv30A0A0B4J1P1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Trbv30A0A0B4J1P1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv30A0A0B4J1P1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv30A0A0B4J1P1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv30A0A0B4J1P1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv30A0A0B4J1P1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Cap2-205ENSMUST00000225824 1634 ntBASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv30A0A0B4J1P1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv30A0A0B4J1P1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv30A0A0B4J1P1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trbv30A0A0B4J1P1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv30A0A0B4J1P1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv30A0A0B4J1P1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv30A0A0B4J1P1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv30A0A0B4J1P1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv30A0A0B4J1P1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv30A0A0B4J1P1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv30A0A0B4J1P1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv30A0A0B4J1P1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv30A0A0B4J1P1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbv30A0A0B4J1P1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv30A0A0B4J1P1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv30A0A0B4J1P1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv30A0A0B4J1P1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv30A0A0B4J1P1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv30A0A0B4J1P1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv30A0A0B4J1P1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv30A0A0B4J1P1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.39■□□□□ 0.21
Trbv30A0A0B4J1P1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv30A0A0B4J1P1 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.38■□□□□ 0.21
Trbv30A0A0B4J1P1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv30A0A0B4J1P1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv30A0A0B4J1P1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv30A0A0B4J1P1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv30A0A0B4J1P1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.37■□□□□ 0.21
Trbv30A0A0B4J1P1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv30A0A0B4J1P1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.37■□□□□ 0.21
Trbv30A0A0B4J1P1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv30A0A0B4J1P1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.37■□□□□ 0.21
Trbv30A0A0B4J1P1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv30A0A0B4J1P1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Gm10420-201ENSMUST00000121713 882 ntBASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv30A0A0B4J1P1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv30A0A0B4J1P1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Trbv30A0A0B4J1P1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv30A0A0B4J1P1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv30A0A0B4J1P1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv30A0A0B4J1P1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms