Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-4A0A0B4J1K2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-4A0A0B4J1K2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Cap2-205ENSMUST00000225824 1634 ntBASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-4A0A0B4J1K2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-4A0A0B4J1K2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Trav9-4A0A0B4J1K2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-4A0A0B4J1K2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trav9-4A0A0B4J1K2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Trav9-4A0A0B4J1K2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav9-4A0A0B4J1K2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-4A0A0B4J1K2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-4A0A0B4J1K2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav9-4A0A0B4J1K2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-4A0A0B4J1K2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.38■□□□□ 0.21
Trav9-4A0A0B4J1K2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav9-4A0A0B4J1K2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-4A0A0B4J1K2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav9-4A0A0B4J1K2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Trav9-4A0A0B4J1K2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9-4A0A0B4J1K2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-4A0A0B4J1K2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-4A0A0B4J1K2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-4A0A0B4J1K2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-4A0A0B4J1K2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-4A0A0B4J1K2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9-4A0A0B4J1K2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-4A0A0B4J1K2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trav9-4A0A0B4J1K2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav9-4A0A0B4J1K2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-4A0A0B4J1K2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav9-4A0A0B4J1K2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-4A0A0B4J1K2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9-4A0A0B4J1K2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav9-4A0A0B4J1K2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-4A0A0B4J1K2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav9-4A0A0B4J1K2 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.35■□□□□ 0.21
Trav9-4A0A0B4J1K2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9-4A0A0B4J1K2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9-4A0A0B4J1K2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9-4A0A0B4J1K2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9-4A0A0B4J1K2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav9-4A0A0B4J1K2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trav9-4A0A0B4J1K2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9-4A0A0B4J1K2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9-4A0A0B4J1K2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.32■□□□□ 0.2
Trav9-4A0A0B4J1K2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav9-4A0A0B4J1K2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav9-4A0A0B4J1K2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-4A0A0B4J1K2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-4A0A0B4J1K2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-4A0A0B4J1K2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9-4A0A0B4J1K2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-4A0A0B4J1K2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-4A0A0B4J1K2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-4A0A0B4J1K2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-4A0A0B4J1K2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9-4A0A0B4J1K2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.31■□□□□ 0.2
Trav9-4A0A0B4J1K2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Trav9-4A0A0B4J1K2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trav9-4A0A0B4J1K2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms