Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv16A0A0B4J1H3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv16A0A0B4J1H3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Mir3960-201ENSMUST00000198213 73 ntBASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv16A0A0B4J1H3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv16A0A0B4J1H3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 Terc-201ENSMUST00000082862 423 ntBASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trbv16A0A0B4J1H3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv16A0A0B4J1H3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv16A0A0B4J1H3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trbv16A0A0B4J1H3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv16A0A0B4J1H3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv16A0A0B4J1H3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv16A0A0B4J1H3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv16A0A0B4J1H3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv16A0A0B4J1H3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trbv16A0A0B4J1H3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv16A0A0B4J1H3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv16A0A0B4J1H3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv16A0A0B4J1H3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv16A0A0B4J1H3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv16A0A0B4J1H3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv16A0A0B4J1H3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.8■□□□□ 0.12
Trbv16A0A0B4J1H3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv16A0A0B4J1H3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbv16A0A0B4J1H3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv16A0A0B4J1H3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv16A0A0B4J1H3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv16A0A0B4J1H3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv16A0A0B4J1H3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv16A0A0B4J1H3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv16A0A0B4J1H3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv16A0A0B4J1H3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv16A0A0B4J1H3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv16A0A0B4J1H3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv16A0A0B4J1H3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv16A0A0B4J1H3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv16A0A0B4J1H3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv16A0A0B4J1H3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv16A0A0B4J1H3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv16A0A0B4J1H3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.78■□□□□ 0.12
Trbv16A0A0B4J1H3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv16A0A0B4J1H3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv16A0A0B4J1H3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv16A0A0B4J1H3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv16A0A0B4J1H3 Gm45364-201ENSMUST00000210883 159 ntBASIC15.77■□□□□ 0.12
Trbv16A0A0B4J1H3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv16A0A0B4J1H3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms