Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trbv15A0A0A6YYE3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv15A0A0A6YYE3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv15A0A0A6YYE3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trbv15A0A0A6YYE3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv15A0A0A6YYE3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv15A0A0A6YYE3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv15A0A0A6YYE3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv15A0A0A6YYE3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv15A0A0A6YYE3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Trbv15A0A0A6YYE3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv15A0A0A6YYE3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv15A0A0A6YYE3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.23■□□□□ 0.51
Trbv15A0A0A6YYE3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.22■□□□□ 0.51
Trbv15A0A0A6YYE3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv15A0A0A6YYE3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv15A0A0A6YYE3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv15A0A0A6YYE3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv15A0A0A6YYE3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv15A0A0A6YYE3 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.21■□□□□ 0.51
Trbv15A0A0A6YYE3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbv15A0A0A6YYE3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv15A0A0A6YYE3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trbv15A0A0A6YYE3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trbv15A0A0A6YYE3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv15A0A0A6YYE3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv15A0A0A6YYE3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv15A0A0A6YYE3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbv15A0A0A6YYE3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv15A0A0A6YYE3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.18■□□□□ 0.5
Trbv15A0A0A6YYE3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv15A0A0A6YYE3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trbv15A0A0A6YYE3 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.18■□□□□ 0.5
Trbv15A0A0A6YYE3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv15A0A0A6YYE3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv15A0A0A6YYE3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv15A0A0A6YYE3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv15A0A0A6YYE3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv15A0A0A6YYE3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv15A0A0A6YYE3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Trbv15A0A0A6YYE3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv15A0A0A6YYE3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv15A0A0A6YYE3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trbv15A0A0A6YYE3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trbv15A0A0A6YYE3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.16■□□□□ 0.5
Trbv15A0A0A6YYE3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv15A0A0A6YYE3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv15A0A0A6YYE3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv15A0A0A6YYE3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.15■□□□□ 0.5
Trbv15A0A0A6YYE3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv15A0A0A6YYE3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv15A0A0A6YYE3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv15A0A0A6YYE3 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.14■□□□□ 0.49
Trbv15A0A0A6YYE3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.14■□□□□ 0.49
Trbv15A0A0A6YYE3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv15A0A0A6YYE3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv15A0A0A6YYE3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv15A0A0A6YYE3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv15A0A0A6YYE3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv15A0A0A6YYE3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trbv15A0A0A6YYE3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trbv15A0A0A6YYE3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.12■□□□□ 0.49
Trbv15A0A0A6YYE3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv15A0A0A6YYE3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv15A0A0A6YYE3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trbv15A0A0A6YYE3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.11■□□□□ 0.49
Trbv15A0A0A6YYE3 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.11■□□□□ 0.49
Trbv15A0A0A6YYE3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv15A0A0A6YYE3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv15A0A0A6YYE3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv15A0A0A6YYE3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trbv15A0A0A6YYE3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv15A0A0A6YYE3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv15A0A0A6YYE3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv15A0A0A6YYE3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trbv15A0A0A6YYE3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv15A0A0A6YYE3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv15A0A0A6YYE3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv15A0A0A6YYE3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms