Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 Gm7332-201ENSMUST00000118351 454 ntBASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav6-4A0A075B6B4 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.84■□□□□ 0.29
Trav6-4A0A075B6B4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6-4A0A075B6B4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-4A0A075B6B4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-4A0A075B6B4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-4A0A075B6B4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-4A0A075B6B4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav6-4A0A075B6B4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-4A0A075B6B4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-4A0A075B6B4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-4A0A075B6B4 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.82■□□□□ 0.28
Trav6-4A0A075B6B4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav6-4A0A075B6B4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-4A0A075B6B4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-4A0A075B6B4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.82■□□□□ 0.28
Trav6-4A0A075B6B4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-4A0A075B6B4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-4A0A075B6B4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.81■□□□□ 0.28
Trav6-4A0A075B6B4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-4A0A075B6B4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-4A0A075B6B4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-4A0A075B6B4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-4A0A075B6B4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-4A0A075B6B4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-4A0A075B6B4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-4A0A075B6B4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-4A0A075B6B4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-4A0A075B6B4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav6-4A0A075B6B4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-4A0A075B6B4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-4A0A075B6B4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav6-4A0A075B6B4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.79■□□□□ 0.28
Trav6-4A0A075B6B4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 Cap2-205ENSMUST00000225824 1634 ntBASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trav6-4A0A075B6B4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-4A0A075B6B4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav6-4A0A075B6B4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.77■□□□□ 0.28
Trav6-4A0A075B6B4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav6-4A0A075B6B4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav6-4A0A075B6B4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-4A0A075B6B4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-4A0A075B6B4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-4A0A075B6B4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trav6-4A0A075B6B4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav6-4A0A075B6B4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-4A0A075B6B4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trav6-4A0A075B6B4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-4A0A075B6B4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav6-4A0A075B6B4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-4A0A075B6B4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-4A0A075B6B4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-4A0A075B6B4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav6-4A0A075B6B4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-4A0A075B6B4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav6-4A0A075B6B4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-4A0A075B6B4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-4A0A075B6B4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-4A0A075B6B4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-4A0A075B6B4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-4A0A075B6B4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-4A0A075B6B4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-4A0A075B6B4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav6-4A0A075B6B4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-4A0A075B6B4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-4A0A075B6B4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms