Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav14d-1A0A075B6B1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav14d-1A0A075B6B1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav14d-1A0A075B6B1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav14d-1A0A075B6B1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav14d-1A0A075B6B1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav14d-1A0A075B6B1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav14d-1A0A075B6B1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav14d-1A0A075B6B1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav14d-1A0A075B6B1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.33■□□□□ 0.2
Trav14d-1A0A075B6B1 Notumos-201ENSMUST00000151998 2659 ntBASIC16.32■□□□□ 0.2
Trav14d-1A0A075B6B1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav14d-1A0A075B6B1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav14d-1A0A075B6B1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav14d-1A0A075B6B1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav14d-1A0A075B6B1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav14d-1A0A075B6B1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14d-1A0A075B6B1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trav14d-1A0A075B6B1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14d-1A0A075B6B1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14d-1A0A075B6B1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14d-1A0A075B6B1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Trav14d-1A0A075B6B1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14d-1A0A075B6B1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14d-1A0A075B6B1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav14d-1A0A075B6B1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav14d-1A0A075B6B1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav14d-1A0A075B6B1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav14d-1A0A075B6B1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav14d-1A0A075B6B1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav14d-1A0A075B6B1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Trav14d-1A0A075B6B1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav14d-1A0A075B6B1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav14d-1A0A075B6B1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav14d-1A0A075B6B1 Gm37136-201ENSMUST00000194368 194 ntBASIC16.28■□□□□ 0.2
Trav14d-1A0A075B6B1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav14d-1A0A075B6B1 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.27■□□□□ 0.2
Trav14d-1A0A075B6B1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav14d-1A0A075B6B1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav14d-1A0A075B6B1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav14d-1A0A075B6B1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.27■□□□□ 0.19
Trav14d-1A0A075B6B1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav14d-1A0A075B6B1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav14d-1A0A075B6B1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav14d-1A0A075B6B1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav14d-1A0A075B6B1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14d-1A0A075B6B1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14d-1A0A075B6B1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14d-1A0A075B6B1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14d-1A0A075B6B1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14d-1A0A075B6B1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14d-1A0A075B6B1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14d-1A0A075B6B1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav14d-1A0A075B6B1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.24■□□□□ 0.19
Trav14d-1A0A075B6B1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14d-1A0A075B6B1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14d-1A0A075B6B1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14d-1A0A075B6B1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14d-1A0A075B6B1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav14d-1A0A075B6B1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav14d-1A0A075B6B1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav14d-1A0A075B6B1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14d-1A0A075B6B1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.21■□□□□ 0.19
Trav14d-1A0A075B6B1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav14d-1A0A075B6B1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.21■□□□□ 0.19
Trav14d-1A0A075B6B1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav14d-1A0A075B6B1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Trav14d-1A0A075B6B1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav14d-1A0A075B6B1 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.21■□□□□ 0.18
Trav14d-1A0A075B6B1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav14d-1A0A075B6B1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14d-1A0A075B6B1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14d-1A0A075B6B1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14d-1A0A075B6B1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14d-1A0A075B6B1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14d-1A0A075B6B1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14d-1A0A075B6B1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14d-1A0A075B6B1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14d-1A0A075B6B1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14d-1A0A075B6B1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14d-1A0A075B6B1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14d-1A0A075B6B1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms