Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6d-7A0A075B6B0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav6d-7A0A075B6B0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-7A0A075B6B0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-7A0A075B6B0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-7A0A075B6B0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-7A0A075B6B0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-7A0A075B6B0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6d-7A0A075B6B0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav6d-7A0A075B6B0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav6d-7A0A075B6B0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-7A0A075B6B0 Gm16437-201ENSMUST00000025669 507 ntBASIC16.83■□□□□ 0.28
Trav6d-7A0A075B6B0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-7A0A075B6B0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-7A0A075B6B0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav6d-7A0A075B6B0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav6d-7A0A075B6B0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-7A0A075B6B0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav6d-7A0A075B6B0 Gm45364-201ENSMUST00000210883 159 ntBASIC16.8■□□□□ 0.28
Trav6d-7A0A075B6B0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav6d-7A0A075B6B0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav6d-7A0A075B6B0 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.79■□□□□ 0.28
Trav6d-7A0A075B6B0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav6d-7A0A075B6B0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-7A0A075B6B0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav6d-7A0A075B6B0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav6d-7A0A075B6B0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-7A0A075B6B0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 Cap2-205ENSMUST00000225824 1634 ntBASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-7A0A075B6B0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-7A0A075B6B0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-7A0A075B6B0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav6d-7A0A075B6B0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav6d-7A0A075B6B0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-7A0A075B6B0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.76■□□□□ 0.27
Trav6d-7A0A075B6B0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-7A0A075B6B0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-7A0A075B6B0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-7A0A075B6B0 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.75■□□□□ 0.27
Trav6d-7A0A075B6B0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-7A0A075B6B0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6d-7A0A075B6B0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav6d-7A0A075B6B0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-7A0A075B6B0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-7A0A075B6B0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-7A0A075B6B0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav6d-7A0A075B6B0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-7A0A075B6B0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav6d-7A0A075B6B0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav6d-7A0A075B6B0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav6d-7A0A075B6B0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-7A0A075B6B0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-7A0A075B6B0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-7A0A075B6B0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-7A0A075B6B0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-7A0A075B6B0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Gm9812-201ENSMUST00000061934 968 ntBASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-7A0A075B6B0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-7A0A075B6B0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms