Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-1A0A075B699 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-1A0A075B699 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-1A0A075B699 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-1A0A075B699 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav9d-1A0A075B699 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav9d-1A0A075B699 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-1A0A075B699 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-1A0A075B699 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-1A0A075B699 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Trav9d-1A0A075B699 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.86■□□□□ 0.29
Trav9d-1A0A075B699 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-1A0A075B699 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-1A0A075B699 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9d-1A0A075B699 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-1A0A075B699 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-1A0A075B699 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-1A0A075B699 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-1A0A075B699 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-1A0A075B699 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9d-1A0A075B699 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trav9d-1A0A075B699 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-1A0A075B699 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav9d-1A0A075B699 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-1A0A075B699 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-1A0A075B699 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-1A0A075B699 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav9d-1A0A075B699 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.83■□□□□ 0.28
Trav9d-1A0A075B699 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9d-1A0A075B699 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav9d-1A0A075B699 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9d-1A0A075B699 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9d-1A0A075B699 Terc-201ENSMUST00000082862 423 ntBASIC16.83■□□□□ 0.28
Trav9d-1A0A075B699 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav9d-1A0A075B699 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-1A0A075B699 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-1A0A075B699 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav9d-1A0A075B699 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-1A0A075B699 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-1A0A075B699 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav9d-1A0A075B699 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.81■□□□□ 0.28
Trav9d-1A0A075B699 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9d-1A0A075B699 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-1A0A075B699 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-1A0A075B699 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav9d-1A0A075B699 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-1A0A075B699 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-1A0A075B699 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav9d-1A0A075B699 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9d-1A0A075B699 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-1A0A075B699 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9d-1A0A075B699 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9d-1A0A075B699 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9d-1A0A075B699 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav9d-1A0A075B699 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.77■□□□□ 0.28
Trav9d-1A0A075B699 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9d-1A0A075B699 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav9d-1A0A075B699 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.77■□□□□ 0.27
Trav9d-1A0A075B699 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav9d-1A0A075B699 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9d-1A0A075B699 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trav9d-1A0A075B699 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav9d-1A0A075B699 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9d-1A0A075B699 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9d-1A0A075B699 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9d-1A0A075B699 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9d-1A0A075B699 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav9d-1A0A075B699 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9d-1A0A075B699 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9d-1A0A075B699 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9d-1A0A075B699 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav9d-1A0A075B699 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav9d-1A0A075B699 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9d-1A0A075B699 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 451.2 ms