Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-2A0A075B649 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Gm37136-201ENSMUST00000194368 194 ntBASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-2A0A075B649 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav13-2A0A075B649 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav13-2A0A075B649 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-2A0A075B649 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-2A0A075B649 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13-2A0A075B649 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-2A0A075B649 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13-2A0A075B649 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-2A0A075B649 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-2A0A075B649 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-2A0A075B649 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-2A0A075B649 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-2A0A075B649 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-2A0A075B649 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-2A0A075B649 Gm6934-201ENSMUST00000194780 1905 ntBASIC14.62□□□□□ -0.07
Trav13-2A0A075B649 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-2A0A075B649 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13-2A0A075B649 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-2A0A075B649 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-2A0A075B649 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav13-2A0A075B649 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-2A0A075B649 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-2A0A075B649 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-2A0A075B649 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-2A0A075B649 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav13-2A0A075B649 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Trav13-2A0A075B649 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav13-2A0A075B649 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-2A0A075B649 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav13-2A0A075B649 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-2A0A075B649 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-2A0A075B649 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-2A0A075B649 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav13-2A0A075B649 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-2A0A075B649 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.59□□□□□ -0.07
Trav13-2A0A075B649 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav13-2A0A075B649 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-2A0A075B649 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13-2A0A075B649 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trav13-2A0A075B649 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-2A0A075B649 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-2A0A075B649 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-2A0A075B649 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-2A0A075B649 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13-2A0A075B649 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-2A0A075B649 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-2A0A075B649 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-2A0A075B649 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.57□□□□□ -0.08
Trav13-2A0A075B649 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13-2A0A075B649 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-2A0A075B649 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-2A0A075B649 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.57□□□□□ -0.08
Trav13-2A0A075B649 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-2A0A075B649 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-2A0A075B649 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-2A0A075B649 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav13-2A0A075B649 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-2A0A075B649 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Trav13-2A0A075B649 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav13-2A0A075B649 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-2A0A075B649 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-2A0A075B649 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-2A0A075B649 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trav13-2A0A075B649 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav13-2A0A075B649 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms