Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.81□□□□□ -0.04
4933424G06RikA0A140LIP3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm37230-201ENSMUST00000194491 818 ntBASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
4933424G06RikA0A140LIP3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm7775-201ENSMUST00000218871 853 ntBASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
4933424G06RikA0A140LIP3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms