Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1S4R1E0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1S4R1E0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1S4R1E0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1S4R1E0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1S4R1E0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb1S4R1E0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
H2afb1S4R1E0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb1S4R1E0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb1S4R1E0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb1S4R1E0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb1S4R1E0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
H2afb1S4R1E0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb1S4R1E0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb1S4R1E0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.89■□□□□ 0.77
H2afb1S4R1E0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb1S4R1E0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.88■□□□□ 0.77
H2afb1S4R1E0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1S4R1E0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1S4R1E0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1S4R1E0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb1S4R1E0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb1S4R1E0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb1S4R1E0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
H2afb1S4R1E0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 Gm7432-201ENSMUST00000210343 879 ntBASIC19.86■□□□□ 0.77
H2afb1S4R1E0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb1S4R1E0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb1S4R1E0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb1S4R1E0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb1S4R1E0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb1S4R1E0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
H2afb1S4R1E0 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.84■□□□□ 0.77
H2afb1S4R1E0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
H2afb1S4R1E0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
H2afb1S4R1E0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
H2afb1S4R1E0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
H2afb1S4R1E0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
H2afb1S4R1E0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.83■□□□□ 0.77
H2afb1S4R1E0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
H2afb1S4R1E0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
H2afb1S4R1E0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
H2afb1S4R1E0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
H2afb1S4R1E0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.83■□□□□ 0.77
H2afb1S4R1E0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afb1S4R1E0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afb1S4R1E0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afb1S4R1E0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
H2afb1S4R1E0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afb1S4R1E0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb1S4R1E0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb1S4R1E0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb1S4R1E0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb1S4R1E0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb1S4R1E0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H2afb1S4R1E0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
H2afb1S4R1E0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
H2afb1S4R1E0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
H2afb1S4R1E0 Gm9812-201ENSMUST00000061934 968 ntBASIC19.81■□□□□ 0.76
H2afb1S4R1E0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
H2afb1S4R1E0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H2afb1S4R1E0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb1S4R1E0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb1S4R1E0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
H2afb1S4R1E0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb1S4R1E0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb1S4R1E0 Mir3960-201ENSMUST00000198213 73 ntBASIC19.8■□□□□ 0.76
H2afb1S4R1E0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb1S4R1E0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb1S4R1E0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
H2afb1S4R1E0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
H2afb1S4R1E0 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.79■□□□□ 0.76
H2afb1S4R1E0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb1S4R1E0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.79■□□□□ 0.76
H2afb1S4R1E0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb1S4R1E0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb1S4R1E0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb1S4R1E0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb1S4R1E0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb1S4R1E0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb1S4R1E0 Gm11599-201ENSMUST00000118720 878 ntBASIC19.78■□□□□ 0.76
H2afb1S4R1E0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.78■□□□□ 0.76
H2afb1S4R1E0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
H2afb1S4R1E0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2afb1S4R1E0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
H2afb1S4R1E0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.77■□□□□ 0.76
H2afb1S4R1E0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
H2afb1S4R1E0 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.77■□□□□ 0.76
H2afb1S4R1E0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
H2afb1S4R1E0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
H2afb1S4R1E0 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.76■□□□□ 0.75
H2afb1S4R1E0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms