Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx9Q9WUH2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx9Q9WUH2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.18■□□□□ 0.98
Lhx9Q9WUH2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lhx9Q9WUH2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.18■□□□□ 0.98
Lhx9Q9WUH2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx9Q9WUH2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Gm5921-201ENSMUST00000075898 882 ntBASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx9Q9WUH2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx9Q9WUH2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx9Q9WUH2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx9Q9WUH2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx9Q9WUH2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx9Q9WUH2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx9Q9WUH2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lhx9Q9WUH2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx9Q9WUH2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lhx9Q9WUH2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lhx9Q9WUH2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lhx9Q9WUH2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx9Q9WUH2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx9Q9WUH2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx9Q9WUH2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Lhx9Q9WUH2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx9Q9WUH2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.13■□□□□ 0.97
Lhx9Q9WUH2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx9Q9WUH2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Lhx9Q9WUH2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx9Q9WUH2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
Lhx9Q9WUH2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx9Q9WUH2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx9Q9WUH2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx9Q9WUH2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx9Q9WUH2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.11■□□□□ 0.97
Lhx9Q9WUH2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx9Q9WUH2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx9Q9WUH2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx9Q9WUH2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx9Q9WUH2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Lhx9Q9WUH2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx9Q9WUH2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.08■□□□□ 0.97
Lhx9Q9WUH2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx9Q9WUH2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.08■□□□□ 0.97
Lhx9Q9WUH2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx9Q9WUH2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx9Q9WUH2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lhx9Q9WUH2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Lhx9Q9WUH2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx9Q9WUH2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx9Q9WUH2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Lhx9Q9WUH2 Gm5812-201ENSMUST00000061073 957 ntBASIC21.07■□□□□ 0.96
Lhx9Q9WUH2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx9Q9WUH2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.07■□□□□ 0.96
Lhx9Q9WUH2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.07■□□□□ 0.96
Lhx9Q9WUH2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.06■□□□□ 0.96
Lhx9Q9WUH2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lhx9Q9WUH2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
Lhx9Q9WUH2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx9Q9WUH2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx9Q9WUH2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.06■□□□□ 0.96
Lhx9Q9WUH2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx9Q9WUH2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx9Q9WUH2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx9Q9WUH2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx9Q9WUH2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lhx9Q9WUH2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx9Q9WUH2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx9Q9WUH2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Lhx9Q9WUH2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx9Q9WUH2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx9Q9WUH2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lhx9Q9WUH2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx9Q9WUH2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx9Q9WUH2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Lhx9Q9WUH2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.03■□□□□ 0.96
Lhx9Q9WUH2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx9Q9WUH2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx9Q9WUH2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx9Q9WUH2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Lhx9Q9WUH2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.02■□□□□ 0.96
Lhx9Q9WUH2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Lhx9Q9WUH2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lhx9Q9WUH2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21■□□□□ 0.95
Lhx9Q9WUH2 Gm6934-201ENSMUST00000194780 1905 ntBASIC21■□□□□ 0.95
Lhx9Q9WUH2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lhx9Q9WUH2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21■□□□□ 0.95
Lhx9Q9WUH2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx9Q9WUH2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx9Q9WUH2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx9Q9WUH2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx9Q9WUH2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx9Q9WUH2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx9Q9WUH2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms