Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lime1Q9EQR5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Lime1Q9EQR5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lime1Q9EQR5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.37■□□□□ 0.69
Lime1Q9EQR5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lime1Q9EQR5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.37■□□□□ 0.69
Lime1Q9EQR5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.37■□□□□ 0.69
Lime1Q9EQR5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lime1Q9EQR5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lime1Q9EQR5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lime1Q9EQR5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lime1Q9EQR5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lime1Q9EQR5 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.35■□□□□ 0.69
Lime1Q9EQR5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lime1Q9EQR5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lime1Q9EQR5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lime1Q9EQR5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lime1Q9EQR5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Gm22567-201ENSMUST00000175542 342 ntBASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.34■□□□□ 0.69
Lime1Q9EQR5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lime1Q9EQR5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lime1Q9EQR5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.33■□□□□ 0.69
Lime1Q9EQR5 Gm8503-201ENSMUST00000118131 455 ntBASIC19.33■□□□□ 0.68
Lime1Q9EQR5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lime1Q9EQR5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.33■□□□□ 0.68
Lime1Q9EQR5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.33■□□□□ 0.68
Lime1Q9EQR5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lime1Q9EQR5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lime1Q9EQR5 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.32■□□□□ 0.68
Lime1Q9EQR5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lime1Q9EQR5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.32■□□□□ 0.68
Lime1Q9EQR5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lime1Q9EQR5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lime1Q9EQR5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.31■□□□□ 0.68
Lime1Q9EQR5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lime1Q9EQR5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.31■□□□□ 0.68
Lime1Q9EQR5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lime1Q9EQR5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.31■□□□□ 0.68
Lime1Q9EQR5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.31■□□□□ 0.68
Lime1Q9EQR5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lime1Q9EQR5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lime1Q9EQR5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lime1Q9EQR5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lime1Q9EQR5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lime1Q9EQR5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lime1Q9EQR5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lime1Q9EQR5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lime1Q9EQR5 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.29■□□□□ 0.68
Lime1Q9EQR5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lime1Q9EQR5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lime1Q9EQR5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lime1Q9EQR5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lime1Q9EQR5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lime1Q9EQR5 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.28■□□□□ 0.68
Lime1Q9EQR5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Lime1Q9EQR5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lime1Q9EQR5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lime1Q9EQR5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lime1Q9EQR5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.28■□□□□ 0.68
Lime1Q9EQR5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lime1Q9EQR5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lime1Q9EQR5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Lime1Q9EQR5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.27■□□□□ 0.68
Lime1Q9EQR5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.27■□□□□ 0.68
Lime1Q9EQR5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lime1Q9EQR5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lime1Q9EQR5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lime1Q9EQR5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lime1Q9EQR5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lime1Q9EQR5 Mir3960-201ENSMUST00000198213 73 ntBASIC19.25■□□□□ 0.67
Lime1Q9EQR5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lime1Q9EQR5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lime1Q9EQR5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lime1Q9EQR5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lime1Q9EQR5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Lime1Q9EQR5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lime1Q9EQR5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.24■□□□□ 0.67
Lime1Q9EQR5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lime1Q9EQR5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lime1Q9EQR5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lime1Q9EQR5 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.23■□□□□ 0.67
Lime1Q9EQR5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.23■□□□□ 0.67
Lime1Q9EQR5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Lime1Q9EQR5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lime1Q9EQR5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Gm45364-201ENSMUST00000210883 159 ntBASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms