Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Nkx2-4Q9EQM3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nkx2-4Q9EQM3 Gm21956-201ENSMUST00000179946 522 ntBASIC23.21■■□□□ 1.31
Nkx2-4Q9EQM3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nkx2-4Q9EQM3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nkx2-4Q9EQM3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nkx2-4Q9EQM3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nkx2-4Q9EQM3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nkx2-4Q9EQM3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nkx2-4Q9EQM3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nkx2-4Q9EQM3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nkx2-4Q9EQM3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
Nkx2-4Q9EQM3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.19■■□□□ 1.3
Nkx2-4Q9EQM3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nkx2-4Q9EQM3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nkx2-4Q9EQM3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nkx2-4Q9EQM3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.18■■□□□ 1.3
Nkx2-4Q9EQM3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Nkx2-4Q9EQM3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nkx2-4Q9EQM3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nkx2-4Q9EQM3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nkx2-4Q9EQM3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nkx2-4Q9EQM3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nkx2-4Q9EQM3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nkx2-4Q9EQM3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nkx2-4Q9EQM3 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.16■■□□□ 1.3
Nkx2-4Q9EQM3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Nkx2-4Q9EQM3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nkx2-4Q9EQM3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.15■■□□□ 1.3
Nkx2-4Q9EQM3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Nkx2-4Q9EQM3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Nkx2-4Q9EQM3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Nkx2-4Q9EQM3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Nkx2-4Q9EQM3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Nkx2-4Q9EQM3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nkx2-4Q9EQM3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nkx2-4Q9EQM3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Nkx2-4Q9EQM3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nkx2-4Q9EQM3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.12■■□□□ 1.29
Nkx2-4Q9EQM3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.12■■□□□ 1.29
Nkx2-4Q9EQM3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.12■■□□□ 1.29
Nkx2-4Q9EQM3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nkx2-4Q9EQM3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nkx2-4Q9EQM3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nkx2-4Q9EQM3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nkx2-4Q9EQM3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nkx2-4Q9EQM3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Nkx2-4Q9EQM3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.11■■□□□ 1.29
Nkx2-4Q9EQM3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.11■■□□□ 1.29
Nkx2-4Q9EQM3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nkx2-4Q9EQM3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.1■■□□□ 1.29
Nkx2-4Q9EQM3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nkx2-4Q9EQM3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nkx2-4Q9EQM3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nkx2-4Q9EQM3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Nkx2-4Q9EQM3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Nkx2-4Q9EQM3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.09■■□□□ 1.29
Nkx2-4Q9EQM3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.09■■□□□ 1.29
Nkx2-4Q9EQM3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Nkx2-4Q9EQM3 Gm22238-201ENSMUST00000175222 88 ntBASIC23.08■■□□□ 1.29
Nkx2-4Q9EQM3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nkx2-4Q9EQM3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Nkx2-4Q9EQM3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nkx2-4Q9EQM3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.28
Nkx2-4Q9EQM3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.08■■□□□ 1.28
Nkx2-4Q9EQM3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Nkx2-4Q9EQM3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Nkx2-4Q9EQM3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Nkx2-4Q9EQM3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nkx2-4Q9EQM3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.06■■□□□ 1.28
Nkx2-4Q9EQM3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.06■■□□□ 1.28
Nkx2-4Q9EQM3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nkx2-4Q9EQM3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nkx2-4Q9EQM3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Nkx2-4Q9EQM3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nkx2-4Q9EQM3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.05■■□□□ 1.28
Nkx2-4Q9EQM3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Nkx2-4Q9EQM3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nkx2-4Q9EQM3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.04■■□□□ 1.28
Nkx2-4Q9EQM3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.04■■□□□ 1.28
Nkx2-4Q9EQM3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nkx2-4Q9EQM3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Nkx2-4Q9EQM3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nkx2-4Q9EQM3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Nkx2-4Q9EQM3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nkx2-4Q9EQM3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Nkx2-4Q9EQM3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.01■■□□□ 1.27
Nkx2-4Q9EQM3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Nkx2-4Q9EQM3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23■■□□□ 1.27
Nkx2-4Q9EQM3 Appbp2os-202ENSMUST00000206972 447 ntBASIC23■■□□□ 1.27
Nkx2-4Q9EQM3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Nkx2-4Q9EQM3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms