Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Bcas2Q9D287 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Bcas2Q9D287 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Bcas2Q9D287 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Bcas2Q9D287 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Bcas2Q9D287 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Bcas2Q9D287 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.38■■□□□ 1.01
Bcas2Q9D287 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Bcas2Q9D287 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.37■■□□□ 1.01
Bcas2Q9D287 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.37■■□□□ 1.01
Bcas2Q9D287 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Bcas2Q9D287 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Bcas2Q9D287 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Bcas2Q9D287 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Bcas2Q9D287 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
Bcas2Q9D287 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Bcas2Q9D287 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Bcas2Q9D287 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Bcas2Q9D287 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Bcas2Q9D287 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Bcas2Q9D287 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.35■■□□□ 1.01
Bcas2Q9D287 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Bcas2Q9D287 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Bcas2Q9D287 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Bcas2Q9D287 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Bcas2Q9D287 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Bcas2Q9D287 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.34■■□□□ 1.01
Bcas2Q9D287 Gm4799-201ENSMUST00000095396 657 ntBASIC21.34■■□□□ 1.01
Bcas2Q9D287 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Bcas2Q9D287 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Bcas2Q9D287 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.32■■□□□ 1
Bcas2Q9D287 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.32■■□□□ 1
Bcas2Q9D287 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Bcas2Q9D287 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.31■■□□□ 1
Bcas2Q9D287 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Bcas2Q9D287 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Bcas2Q9D287 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bcas2Q9D287 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Bcas2Q9D287 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Bcas2Q9D287 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.3■■□□□ 1
Bcas2Q9D287 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.3■■□□□ 1
Bcas2Q9D287 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.3■■□□□ 1
Bcas2Q9D287 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bcas2Q9D287 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Bcas2Q9D287 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Bcas2Q9D287 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.29■■□□□ 1
Bcas2Q9D287 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.29■■□□□ 1
Bcas2Q9D287 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.29■■□□□ 1
Bcas2Q9D287 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bcas2Q9D287 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Bcas2Q9D287 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bcas2Q9D287 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Bcas2Q9D287 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Bcas2Q9D287 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.28■■□□□ 1
Bcas2Q9D287 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Bcas2Q9D287 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Bcas2Q9D287 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.27■■□□□ 1
Bcas2Q9D287 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.27■■□□□ 1
Bcas2Q9D287 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.27■■□□□ 1
Bcas2Q9D287 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Bcas2Q9D287 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.27■■□□□ 1
Bcas2Q9D287 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Bcas2Q9D287 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Bcas2Q9D287 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
Bcas2Q9D287 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bcas2Q9D287 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Bcas2Q9D287 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Bcas2Q9D287 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Bcas2Q9D287 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Bcas2Q9D287 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Bcas2Q9D287 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Bcas2Q9D287 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bcas2Q9D287 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bcas2Q9D287 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Bcas2Q9D287 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.24■□□□□ 0.99
Bcas2Q9D287 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Bcas2Q9D287 Mir3960-201ENSMUST00000198213 73 ntBASIC21.24■□□□□ 0.99
Bcas2Q9D287 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.24■□□□□ 0.99
Bcas2Q9D287 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bcas2Q9D287 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Bcas2Q9D287 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bcas2Q9D287 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Bcas2Q9D287 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Bcas2Q9D287 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Bcas2Q9D287 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.23■□□□□ 0.99
Bcas2Q9D287 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Bcas2Q9D287 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bcas2Q9D287 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Bcas2Q9D287 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bcas2Q9D287 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.21■□□□□ 0.99
Bcas2Q9D287 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.21■□□□□ 0.99
Bcas2Q9D287 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bcas2Q9D287 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bcas2Q9D287 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Bcas2Q9D287 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Bcas2Q9D287 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bcas2Q9D287 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bcas2Q9D287 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bcas2Q9D287 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bcas2Q9D287 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms