Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Krt88Q9CPR6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Krt88Q9CPR6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt88Q9CPR6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt88Q9CPR6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Krt88Q9CPR6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.9■□□□□ 0.78
Krt88Q9CPR6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt88Q9CPR6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Krt88Q9CPR6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Krt88Q9CPR6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt88Q9CPR6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Krt88Q9CPR6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.89■□□□□ 0.77
Krt88Q9CPR6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt88Q9CPR6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt88Q9CPR6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt88Q9CPR6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Krt88Q9CPR6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt88Q9CPR6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.88■□□□□ 0.77
Krt88Q9CPR6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt88Q9CPR6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt88Q9CPR6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt88Q9CPR6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Krt88Q9CPR6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt88Q9CPR6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt88Q9CPR6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Krt88Q9CPR6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Krt88Q9CPR6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Krt88Q9CPR6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt88Q9CPR6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt88Q9CPR6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt88Q9CPR6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt88Q9CPR6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt88Q9CPR6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt88Q9CPR6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Krt88Q9CPR6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Krt88Q9CPR6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt88Q9CPR6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt88Q9CPR6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Krt88Q9CPR6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt88Q9CPR6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt88Q9CPR6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.84■□□□□ 0.77
Krt88Q9CPR6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Krt88Q9CPR6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.84■□□□□ 0.77
Krt88Q9CPR6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.84■□□□□ 0.77
Krt88Q9CPR6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt88Q9CPR6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Krt88Q9CPR6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt88Q9CPR6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt88Q9CPR6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt88Q9CPR6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Krt88Q9CPR6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt88Q9CPR6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt88Q9CPR6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt88Q9CPR6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.82■□□□□ 0.76
Krt88Q9CPR6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Krt88Q9CPR6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt88Q9CPR6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt88Q9CPR6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
Krt88Q9CPR6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Krt88Q9CPR6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt88Q9CPR6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Krt88Q9CPR6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Krt88Q9CPR6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt88Q9CPR6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt88Q9CPR6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt88Q9CPR6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.8■□□□□ 0.76
Krt88Q9CPR6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt88Q9CPR6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt88Q9CPR6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt88Q9CPR6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Krt88Q9CPR6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt88Q9CPR6 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.79■□□□□ 0.76
Krt88Q9CPR6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt88Q9CPR6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt88Q9CPR6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt88Q9CPR6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Krt88Q9CPR6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt88Q9CPR6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt88Q9CPR6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt88Q9CPR6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt88Q9CPR6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt88Q9CPR6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Krt88Q9CPR6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt88Q9CPR6 Nkain2-201ENSMUST00000092602 558 ntBASIC19.77■□□□□ 0.76
Krt88Q9CPR6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt88Q9CPR6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Krt88Q9CPR6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt88Q9CPR6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt88Q9CPR6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt88Q9CPR6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt88Q9CPR6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Krt88Q9CPR6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Krt88Q9CPR6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt88Q9CPR6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Krt88Q9CPR6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt88Q9CPR6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Krt88Q9CPR6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt88Q9CPR6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.74■□□□□ 0.75
Krt88Q9CPR6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.74■□□□□ 0.75
Krt88Q9CPR6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms