Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ebf4Q8K4J2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf4Q8K4J2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf4Q8K4J2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf4Q8K4J2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ebf4Q8K4J2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ebf4Q8K4J2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf4Q8K4J2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf4Q8K4J2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf4Q8K4J2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.19■□□□□ 0.82
Ebf4Q8K4J2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ebf4Q8K4J2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ebf4Q8K4J2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf4Q8K4J2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf4Q8K4J2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf4Q8K4J2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Ebf4Q8K4J2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf4Q8K4J2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf4Q8K4J2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ebf4Q8K4J2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ebf4Q8K4J2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf4Q8K4J2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ebf4Q8K4J2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Ebf4Q8K4J2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf4Q8K4J2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf4Q8K4J2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ebf4Q8K4J2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Ebf4Q8K4J2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Ebf4Q8K4J2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ebf4Q8K4J2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ebf4Q8K4J2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ebf4Q8K4J2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.14■□□□□ 0.81
Ebf4Q8K4J2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf4Q8K4J2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.13■□□□□ 0.81
Ebf4Q8K4J2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf4Q8K4J2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ebf4Q8K4J2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ebf4Q8K4J2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ebf4Q8K4J2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ebf4Q8K4J2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.12■□□□□ 0.81
Ebf4Q8K4J2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.12■□□□□ 0.81
Ebf4Q8K4J2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf4Q8K4J2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ebf4Q8K4J2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf4Q8K4J2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ebf4Q8K4J2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ebf4Q8K4J2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ebf4Q8K4J2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.11■□□□□ 0.81
Ebf4Q8K4J2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.11■□□□□ 0.81
Ebf4Q8K4J2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ebf4Q8K4J2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
Ebf4Q8K4J2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ebf4Q8K4J2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ebf4Q8K4J2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Ebf4Q8K4J2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf4Q8K4J2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf4Q8K4J2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf4Q8K4J2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Ebf4Q8K4J2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf4Q8K4J2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ebf4Q8K4J2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Ebf4Q8K4J2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ebf4Q8K4J2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ebf4Q8K4J2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.08■□□□□ 0.81
Ebf4Q8K4J2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ebf4Q8K4J2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.08■□□□□ 0.81
Ebf4Q8K4J2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ebf4Q8K4J2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ebf4Q8K4J2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf4Q8K4J2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf4Q8K4J2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf4Q8K4J2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf4Q8K4J2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf4Q8K4J2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ebf4Q8K4J2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.07■□□□□ 0.8
Ebf4Q8K4J2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ebf4Q8K4J2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf4Q8K4J2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ebf4Q8K4J2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf4Q8K4J2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ebf4Q8K4J2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf4Q8K4J2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf4Q8K4J2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.05■□□□□ 0.8
Ebf4Q8K4J2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf4Q8K4J2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf4Q8K4J2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf4Q8K4J2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf4Q8K4J2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ebf4Q8K4J2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf4Q8K4J2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ebf4Q8K4J2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf4Q8K4J2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms