Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Cnot6Q8K3P5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cnot6Q8K3P5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cnot6Q8K3P5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cnot6Q8K3P5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cnot6Q8K3P5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cnot6Q8K3P5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cnot6Q8K3P5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cnot6Q8K3P5 Gm11599-201ENSMUST00000118720 878 ntBASIC21.59■■□□□ 1.05
Cnot6Q8K3P5 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.59■■□□□ 1.05
Cnot6Q8K3P5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cnot6Q8K3P5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cnot6Q8K3P5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.58■■□□□ 1.05
Cnot6Q8K3P5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cnot6Q8K3P5 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.58■■□□□ 1.05
Cnot6Q8K3P5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cnot6Q8K3P5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.57■■□□□ 1.04
Cnot6Q8K3P5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cnot6Q8K3P5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cnot6Q8K3P5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cnot6Q8K3P5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cnot6Q8K3P5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cnot6Q8K3P5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cnot6Q8K3P5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cnot6Q8K3P5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cnot6Q8K3P5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cnot6Q8K3P5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cnot6Q8K3P5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cnot6Q8K3P5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.55■■□□□ 1.04
Cnot6Q8K3P5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cnot6Q8K3P5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.54■■□□□ 1.04
Cnot6Q8K3P5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.54■■□□□ 1.04
Cnot6Q8K3P5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cnot6Q8K3P5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cnot6Q8K3P5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cnot6Q8K3P5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cnot6Q8K3P5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cnot6Q8K3P5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.53■■□□□ 1.04
Cnot6Q8K3P5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cnot6Q8K3P5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cnot6Q8K3P5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cnot6Q8K3P5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Cnot6Q8K3P5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cnot6Q8K3P5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cnot6Q8K3P5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cnot6Q8K3P5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cnot6Q8K3P5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cnot6Q8K3P5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Cnot6Q8K3P5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cnot6Q8K3P5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cnot6Q8K3P5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cnot6Q8K3P5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cnot6Q8K3P5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cnot6Q8K3P5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cnot6Q8K3P5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cnot6Q8K3P5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cnot6Q8K3P5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cnot6Q8K3P5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.48■■□□□ 1.03
Cnot6Q8K3P5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cnot6Q8K3P5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cnot6Q8K3P5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Cnot6Q8K3P5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cnot6Q8K3P5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
Cnot6Q8K3P5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cnot6Q8K3P5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Cnot6Q8K3P5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cnot6Q8K3P5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cnot6Q8K3P5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cnot6Q8K3P5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Cnot6Q8K3P5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cnot6Q8K3P5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cnot6Q8K3P5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Cnot6Q8K3P5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cnot6Q8K3P5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cnot6Q8K3P5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cnot6Q8K3P5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cnot6Q8K3P5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cnot6Q8K3P5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cnot6Q8K3P5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnot6Q8K3P5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cnot6Q8K3P5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.43■■□□□ 1.02
Cnot6Q8K3P5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnot6Q8K3P5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cnot6Q8K3P5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.43■■□□□ 1.02
Cnot6Q8K3P5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnot6Q8K3P5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cnot6Q8K3P5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.42■■□□□ 1.02
Cnot6Q8K3P5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cnot6Q8K3P5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cnot6Q8K3P5 Gm4799-201ENSMUST00000095396 657 ntBASIC21.42■■□□□ 1.02
Cnot6Q8K3P5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cnot6Q8K3P5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot6Q8K3P5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot6Q8K3P5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
Cnot6Q8K3P5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cnot6Q8K3P5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot6Q8K3P5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot6Q8K3P5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.41■■□□□ 1.02
Cnot6Q8K3P5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot6Q8K3P5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms