Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PdgfcQ8CI19 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PdgfcQ8CI19 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PdgfcQ8CI19 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PdgfcQ8CI19 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.79■■□□□ 1.56
PdgfcQ8CI19 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.79■■□□□ 1.56
PdgfcQ8CI19 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PdgfcQ8CI19 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PdgfcQ8CI19 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PdgfcQ8CI19 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PdgfcQ8CI19 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PdgfcQ8CI19 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PdgfcQ8CI19 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PdgfcQ8CI19 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PdgfcQ8CI19 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PdgfcQ8CI19 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.76■■□□□ 1.55
PdgfcQ8CI19 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.76■■□□□ 1.55
PdgfcQ8CI19 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PdgfcQ8CI19 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PdgfcQ8CI19 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PdgfcQ8CI19 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PdgfcQ8CI19 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PdgfcQ8CI19 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PdgfcQ8CI19 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PdgfcQ8CI19 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PdgfcQ8CI19 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PdgfcQ8CI19 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PdgfcQ8CI19 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PdgfcQ8CI19 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PdgfcQ8CI19 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
PdgfcQ8CI19 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PdgfcQ8CI19 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
PdgfcQ8CI19 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PdgfcQ8CI19 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PdgfcQ8CI19 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PdgfcQ8CI19 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PdgfcQ8CI19 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PdgfcQ8CI19 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PdgfcQ8CI19 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.7■■□□□ 1.54
PdgfcQ8CI19 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.7■■□□□ 1.54
PdgfcQ8CI19 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PdgfcQ8CI19 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PdgfcQ8CI19 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PdgfcQ8CI19 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PdgfcQ8CI19 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PdgfcQ8CI19 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PdgfcQ8CI19 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.69■■□□□ 1.54
PdgfcQ8CI19 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PdgfcQ8CI19 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
PdgfcQ8CI19 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PdgfcQ8CI19 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PdgfcQ8CI19 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PdgfcQ8CI19 Gm10232-201ENSMUST00000089221 720 ntBASIC24.68■■□□□ 1.54
PdgfcQ8CI19 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PdgfcQ8CI19 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PdgfcQ8CI19 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PdgfcQ8CI19 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PdgfcQ8CI19 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PdgfcQ8CI19 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PdgfcQ8CI19 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PdgfcQ8CI19 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PdgfcQ8CI19 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.65■■□□□ 1.54
PdgfcQ8CI19 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PdgfcQ8CI19 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PdgfcQ8CI19 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PdgfcQ8CI19 Etf1-202ENSMUST00000180351 108 ntBASIC24.64■■□□□ 1.54
PdgfcQ8CI19 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PdgfcQ8CI19 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PdgfcQ8CI19 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PdgfcQ8CI19 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PdgfcQ8CI19 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PdgfcQ8CI19 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PdgfcQ8CI19 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PdgfcQ8CI19 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PdgfcQ8CI19 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PdgfcQ8CI19 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PdgfcQ8CI19 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PdgfcQ8CI19 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PdgfcQ8CI19 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PdgfcQ8CI19 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PdgfcQ8CI19 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PdgfcQ8CI19 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
PdgfcQ8CI19 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.6■■□□□ 1.53
PdgfcQ8CI19 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PdgfcQ8CI19 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PdgfcQ8CI19 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.6■■□□□ 1.53
PdgfcQ8CI19 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
PdgfcQ8CI19 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.59■■□□□ 1.53
PdgfcQ8CI19 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PdgfcQ8CI19 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PdgfcQ8CI19 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PdgfcQ8CI19 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
PdgfcQ8CI19 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PdgfcQ8CI19 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PdgfcQ8CI19 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PdgfcQ8CI19 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PdgfcQ8CI19 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PdgfcQ8CI19 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PdgfcQ8CI19 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PdgfcQ8CI19 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms