Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sox30Q8CGW4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox30Q8CGW4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox30Q8CGW4 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.47■■□□□ 1.51
Sox30Q8CGW4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox30Q8CGW4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox30Q8CGW4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox30Q8CGW4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Sox30Q8CGW4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.46■■□□□ 1.51
Sox30Q8CGW4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sox30Q8CGW4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.46■■□□□ 1.51
Sox30Q8CGW4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Sox30Q8CGW4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.46■■□□□ 1.51
Sox30Q8CGW4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sox30Q8CGW4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Sox30Q8CGW4 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.45■■□□□ 1.51
Sox30Q8CGW4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sox30Q8CGW4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.44■■□□□ 1.5
Sox30Q8CGW4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sox30Q8CGW4 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.43■■□□□ 1.5
Sox30Q8CGW4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sox30Q8CGW4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sox30Q8CGW4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Sox30Q8CGW4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sox30Q8CGW4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.42■■□□□ 1.5
Sox30Q8CGW4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sox30Q8CGW4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Sox30Q8CGW4 Gm6821-201ENSMUST00000107540 542 ntBASIC24.41■■□□□ 1.5
Sox30Q8CGW4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Sox30Q8CGW4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sox30Q8CGW4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.4■■□□□ 1.5
Sox30Q8CGW4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.4■■□□□ 1.5
Sox30Q8CGW4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sox30Q8CGW4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sox30Q8CGW4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.39■■□□□ 1.49
Sox30Q8CGW4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.38■■□□□ 1.49
Sox30Q8CGW4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sox30Q8CGW4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sox30Q8CGW4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sox30Q8CGW4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sox30Q8CGW4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox30Q8CGW4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox30Q8CGW4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox30Q8CGW4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sox30Q8CGW4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sox30Q8CGW4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.35■■□□□ 1.49
Sox30Q8CGW4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Sox30Q8CGW4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sox30Q8CGW4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sox30Q8CGW4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sox30Q8CGW4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.34■■□□□ 1.49
Sox30Q8CGW4 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.34■■□□□ 1.49
Sox30Q8CGW4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.34■■□□□ 1.49
Sox30Q8CGW4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.34■■□□□ 1.49
Sox30Q8CGW4 Gm4799-201ENSMUST00000095396 657 ntBASIC24.34■■□□□ 1.49
Sox30Q8CGW4 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.34■■□□□ 1.49
Sox30Q8CGW4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
Sox30Q8CGW4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Sox30Q8CGW4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Sox30Q8CGW4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Sox30Q8CGW4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Sox30Q8CGW4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Sox30Q8CGW4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Sox30Q8CGW4 Gm8503-201ENSMUST00000118131 455 ntBASIC24.32■■□□□ 1.48
Sox30Q8CGW4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.32■■□□□ 1.48
Sox30Q8CGW4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
Sox30Q8CGW4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Sox30Q8CGW4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.31■■□□□ 1.48
Sox30Q8CGW4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sox30Q8CGW4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.31■■□□□ 1.48
Sox30Q8CGW4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sox30Q8CGW4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sox30Q8CGW4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sox30Q8CGW4 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.3■■□□□ 1.48
Sox30Q8CGW4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Sox30Q8CGW4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox30Q8CGW4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Sox30Q8CGW4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox30Q8CGW4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox30Q8CGW4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox30Q8CGW4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox30Q8CGW4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.29■■□□□ 1.48
Sox30Q8CGW4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
Sox30Q8CGW4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.28■■□□□ 1.48
Sox30Q8CGW4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox30Q8CGW4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Sox30Q8CGW4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox30Q8CGW4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox30Q8CGW4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sox30Q8CGW4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox30Q8CGW4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox30Q8CGW4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox30Q8CGW4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox30Q8CGW4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Sox30Q8CGW4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sox30Q8CGW4 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.26■■□□□ 1.47
Sox30Q8CGW4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sox30Q8CGW4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.26■■□□□ 1.47
Sox30Q8CGW4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sox30Q8CGW4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms