Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.83■■□□□ 1.08
Ccdc28bQ8CEG5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc28bQ8CEG5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc28bQ8CEG5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc28bQ8CEG5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.82■■□□□ 1.08
Ccdc28bQ8CEG5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Ccdc28bQ8CEG5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc28bQ8CEG5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc28bQ8CEG5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc28bQ8CEG5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc28bQ8CEG5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc28bQ8CEG5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc28bQ8CEG5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ccdc28bQ8CEG5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc28bQ8CEG5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc28bQ8CEG5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc28bQ8CEG5 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.79■■□□□ 1.08
Ccdc28bQ8CEG5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc28bQ8CEG5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc28bQ8CEG5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
Ccdc28bQ8CEG5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc28bQ8CEG5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc28bQ8CEG5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc28bQ8CEG5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc28bQ8CEG5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ccdc28bQ8CEG5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc28bQ8CEG5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc28bQ8CEG5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc28bQ8CEG5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.76■■□□□ 1.07
Ccdc28bQ8CEG5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc28bQ8CEG5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc28bQ8CEG5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.75■■□□□ 1.07
Ccdc28bQ8CEG5 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.75■■□□□ 1.07
Ccdc28bQ8CEG5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ccdc28bQ8CEG5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc28bQ8CEG5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.74■■□□□ 1.07
Ccdc28bQ8CEG5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc28bQ8CEG5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc28bQ8CEG5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc28bQ8CEG5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc28bQ8CEG5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc28bQ8CEG5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc28bQ8CEG5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.73■■□□□ 1.07
Ccdc28bQ8CEG5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc28bQ8CEG5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc28bQ8CEG5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc28bQ8CEG5 Nkain2-201ENSMUST00000092602 558 ntBASIC21.71■■□□□ 1.07
Ccdc28bQ8CEG5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc28bQ8CEG5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc28bQ8CEG5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc28bQ8CEG5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc28bQ8CEG5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc28bQ8CEG5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc28bQ8CEG5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc28bQ8CEG5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc28bQ8CEG5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc28bQ8CEG5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc28bQ8CEG5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc28bQ8CEG5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc28bQ8CEG5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc28bQ8CEG5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc28bQ8CEG5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc28bQ8CEG5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.67■■□□□ 1.06
Ccdc28bQ8CEG5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc28bQ8CEG5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc28bQ8CEG5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc28bQ8CEG5 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.65■■□□□ 1.06
Ccdc28bQ8CEG5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc28bQ8CEG5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ccdc28bQ8CEG5 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.65■■□□□ 1.06
Ccdc28bQ8CEG5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc28bQ8CEG5 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.65■■□□□ 1.06
Ccdc28bQ8CEG5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.65■■□□□ 1.06
Ccdc28bQ8CEG5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc28bQ8CEG5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Ccdc28bQ8CEG5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc28bQ8CEG5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc28bQ8CEG5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc28bQ8CEG5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc28bQ8CEG5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc28bQ8CEG5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc28bQ8CEG5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc28bQ8CEG5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccdc28bQ8CEG5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc28bQ8CEG5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc28bQ8CEG5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc28bQ8CEG5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc28bQ8CEG5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc28bQ8CEG5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms