Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Nek11Q8C0Q4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.39■■□□□ 1.82
Nek11Q8C0Q4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Nek11Q8C0Q4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Nek11Q8C0Q4 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.38■■□□□ 1.81
Nek11Q8C0Q4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Nek11Q8C0Q4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Gm12366-201ENSMUST00000121722 873 ntBASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Gm5786-201ENSMUST00000085368 882 ntBASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nek11Q8C0Q4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Nek11Q8C0Q4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nek11Q8C0Q4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Nek11Q8C0Q4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Nek11Q8C0Q4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Gm7332-201ENSMUST00000118351 454 ntBASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek11Q8C0Q4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nek11Q8C0Q4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.3■■□□□ 1.8
Nek11Q8C0Q4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nek11Q8C0Q4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nek11Q8C0Q4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Nek11Q8C0Q4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nek11Q8C0Q4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nek11Q8C0Q4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nek11Q8C0Q4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nek11Q8C0Q4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nek11Q8C0Q4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nek11Q8C0Q4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.25■■□□□ 1.79
Nek11Q8C0Q4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nek11Q8C0Q4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nek11Q8C0Q4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nek11Q8C0Q4 Cap2-205ENSMUST00000225824 1634 ntBASIC26.22■■□□□ 1.79
Nek11Q8C0Q4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nek11Q8C0Q4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Nek11Q8C0Q4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nek11Q8C0Q4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nek11Q8C0Q4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Nek11Q8C0Q4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nek11Q8C0Q4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nek11Q8C0Q4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.19■■□□□ 1.78
Nek11Q8C0Q4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms