Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm11Q8BUV6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm11Q8BUV6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm11Q8BUV6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm11Q8BUV6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm11Q8BUV6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.76■□□□□ 0.59
Lsm11Q8BUV6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm11Q8BUV6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm11Q8BUV6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm11Q8BUV6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm11Q8BUV6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm11Q8BUV6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm11Q8BUV6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.74■□□□□ 0.59
Lsm11Q8BUV6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm11Q8BUV6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm11Q8BUV6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm11Q8BUV6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm11Q8BUV6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm11Q8BUV6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm11Q8BUV6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm11Q8BUV6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm11Q8BUV6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm11Q8BUV6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm11Q8BUV6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.73■□□□□ 0.59
Lsm11Q8BUV6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm11Q8BUV6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm11Q8BUV6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm11Q8BUV6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm11Q8BUV6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm11Q8BUV6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm11Q8BUV6 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.72■□□□□ 0.59
Lsm11Q8BUV6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm11Q8BUV6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm11Q8BUV6 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.71■□□□□ 0.59
Lsm11Q8BUV6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.71■□□□□ 0.59
Lsm11Q8BUV6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm11Q8BUV6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lsm11Q8BUV6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.71■□□□□ 0.59
Lsm11Q8BUV6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm11Q8BUV6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm11Q8BUV6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm11Q8BUV6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.7■□□□□ 0.58
Lsm11Q8BUV6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.7■□□□□ 0.58
Lsm11Q8BUV6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm11Q8BUV6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm11Q8BUV6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm11Q8BUV6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm11Q8BUV6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm11Q8BUV6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Lsm11Q8BUV6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lsm11Q8BUV6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm11Q8BUV6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm11Q8BUV6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm11Q8BUV6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.68■□□□□ 0.58
Lsm11Q8BUV6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm11Q8BUV6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm11Q8BUV6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm11Q8BUV6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm11Q8BUV6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm11Q8BUV6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm11Q8BUV6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lsm11Q8BUV6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm11Q8BUV6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Lsm11Q8BUV6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm11Q8BUV6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm11Q8BUV6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lsm11Q8BUV6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm11Q8BUV6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.65■□□□□ 0.58
Lsm11Q8BUV6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm11Q8BUV6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.65■□□□□ 0.58
Lsm11Q8BUV6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm11Q8BUV6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm11Q8BUV6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lsm11Q8BUV6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lsm11Q8BUV6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Lsm11Q8BUV6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Lsm11Q8BUV6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.64■□□□□ 0.57
Lsm11Q8BUV6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Lsm11Q8BUV6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lsm11Q8BUV6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lsm11Q8BUV6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms