Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf18Q8BM39 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf18Q8BM39 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Prpf18Q8BM39 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf18Q8BM39 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf18Q8BM39 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Prpf18Q8BM39 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.91■□□□□ 0.94
Prpf18Q8BM39 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf18Q8BM39 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf18Q8BM39 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Prpf18Q8BM39 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf18Q8BM39 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf18Q8BM39 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Prpf18Q8BM39 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf18Q8BM39 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Prpf18Q8BM39 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Prpf18Q8BM39 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Prpf18Q8BM39 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf18Q8BM39 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.89■□□□□ 0.94
Prpf18Q8BM39 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf18Q8BM39 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf18Q8BM39 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.89■□□□□ 0.93
Prpf18Q8BM39 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf18Q8BM39 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf18Q8BM39 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf18Q8BM39 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf18Q8BM39 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.88■□□□□ 0.93
Prpf18Q8BM39 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.88■□□□□ 0.93
Prpf18Q8BM39 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf18Q8BM39 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf18Q8BM39 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf18Q8BM39 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.86■□□□□ 0.93
Prpf18Q8BM39 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.86■□□□□ 0.93
Prpf18Q8BM39 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf18Q8BM39 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Prpf18Q8BM39 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf18Q8BM39 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf18Q8BM39 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.85■□□□□ 0.93
Prpf18Q8BM39 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf18Q8BM39 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prpf18Q8BM39 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf18Q8BM39 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.84■□□□□ 0.93
Prpf18Q8BM39 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Prpf18Q8BM39 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf18Q8BM39 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.84■□□□□ 0.93
Prpf18Q8BM39 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.84■□□□□ 0.93
Prpf18Q8BM39 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prpf18Q8BM39 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prpf18Q8BM39 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prpf18Q8BM39 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prpf18Q8BM39 Gm8503-201ENSMUST00000118131 455 ntBASIC20.83■□□□□ 0.93
Prpf18Q8BM39 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf18Q8BM39 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prpf18Q8BM39 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf18Q8BM39 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf18Q8BM39 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.81■□□□□ 0.92
Prpf18Q8BM39 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf18Q8BM39 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf18Q8BM39 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.8■□□□□ 0.92
Prpf18Q8BM39 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf18Q8BM39 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.8■□□□□ 0.92
Prpf18Q8BM39 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf18Q8BM39 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Prpf18Q8BM39 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf18Q8BM39 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf18Q8BM39 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Prpf18Q8BM39 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf18Q8BM39 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf18Q8BM39 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf18Q8BM39 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf18Q8BM39 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf18Q8BM39 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf18Q8BM39 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf18Q8BM39 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Prpf18Q8BM39 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf18Q8BM39 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Prpf18Q8BM39 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.77■□□□□ 0.91
Prpf18Q8BM39 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf18Q8BM39 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf18Q8BM39 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf18Q8BM39 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.76■□□□□ 0.91
Prpf18Q8BM39 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf18Q8BM39 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Gm37136-201ENSMUST00000194368 194 ntBASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms