Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Srrm4Q8BKA3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Gm44428-201ENSMUST00000204474 874 ntBASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm4Q8BKA3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Srrm4Q8BKA3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Srrm4Q8BKA3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Srrm4Q8BKA3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.13■□□□□ 0.65
Srrm4Q8BKA3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.13■□□□□ 0.65
Srrm4Q8BKA3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.13■□□□□ 0.65
Srrm4Q8BKA3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Srrm4Q8BKA3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Gm14523-201ENSMUST00000117260 558 ntBASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Srrm4Q8BKA3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.11■□□□□ 0.65
Srrm4Q8BKA3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Srrm4Q8BKA3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Srrm4Q8BKA3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Srrm4Q8BKA3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Srrm4Q8BKA3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Srrm4Q8BKA3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srrm4Q8BKA3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srrm4Q8BKA3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srrm4Q8BKA3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Srrm4Q8BKA3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Srrm4Q8BKA3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Srrm4Q8BKA3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.09■□□□□ 0.65
Srrm4Q8BKA3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.09■□□□□ 0.65
Srrm4Q8BKA3 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.08■□□□□ 0.65
Srrm4Q8BKA3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Srrm4Q8BKA3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Srrm4Q8BKA3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Srrm4Q8BKA3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Srrm4Q8BKA3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Srrm4Q8BKA3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.07■□□□□ 0.64
Srrm4Q8BKA3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.07■□□□□ 0.64
Srrm4Q8BKA3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.07■□□□□ 0.64
Srrm4Q8BKA3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Srrm4Q8BKA3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Gm7332-201ENSMUST00000118351 454 ntBASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Srrm4Q8BKA3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Srrm4Q8BKA3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srrm4Q8BKA3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Srrm4Q8BKA3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Srrm4Q8BKA3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srrm4Q8BKA3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Srrm4Q8BKA3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srrm4Q8BKA3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srrm4Q8BKA3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srrm4Q8BKA3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srrm4Q8BKA3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Srrm4Q8BKA3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Srrm4Q8BKA3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Srrm4Q8BKA3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Srrm4Q8BKA3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Srrm4Q8BKA3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Srrm4Q8BKA3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Srrm4Q8BKA3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Srrm4Q8BKA3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Srrm4Q8BKA3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.02■□□□□ 0.63
Srrm4Q8BKA3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Srrm4Q8BKA3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm4Q8BKA3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms