Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
Abcf1Q6P542 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Abcf1Q6P542 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Abcf1Q6P542 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Abcf1Q6P542 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Abcf1Q6P542 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.62■■□□□ 1.53
Abcf1Q6P542 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.61■■□□□ 1.53
Abcf1Q6P542 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Abcf1Q6P542 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Abcf1Q6P542 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Abcf1Q6P542 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Abcf1Q6P542 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.6■■□□□ 1.53
Abcf1Q6P542 Gm4799-201ENSMUST00000095396 657 ntBASIC24.6■■□□□ 1.53
Abcf1Q6P542 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Abcf1Q6P542 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Abcf1Q6P542 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Abcf1Q6P542 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.58■■□□□ 1.53
Abcf1Q6P542 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.58■■□□□ 1.53
Abcf1Q6P542 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Abcf1Q6P542 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Abcf1Q6P542 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.58■■□□□ 1.53
Abcf1Q6P542 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.58■■□□□ 1.53
Abcf1Q6P542 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Abcf1Q6P542 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Abcf1Q6P542 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Abcf1Q6P542 Gm6311-201ENSMUST00000073790 878 ntBASIC24.57■■□□□ 1.52
Abcf1Q6P542 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Abcf1Q6P542 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Abcf1Q6P542 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
Abcf1Q6P542 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.56■■□□□ 1.52
Abcf1Q6P542 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Abcf1Q6P542 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Abcf1Q6P542 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.56■■□□□ 1.52
Abcf1Q6P542 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Abcf1Q6P542 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.55■■□□□ 1.52
Abcf1Q6P542 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Abcf1Q6P542 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Abcf1Q6P542 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Abcf1Q6P542 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.54■■□□□ 1.52
Abcf1Q6P542 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Abcf1Q6P542 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Abcf1Q6P542 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.54■■□□□ 1.52
Abcf1Q6P542 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Abcf1Q6P542 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Abcf1Q6P542 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Abcf1Q6P542 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Abcf1Q6P542 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Abcf1Q6P542 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Abcf1Q6P542 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.52■■□□□ 1.52
Abcf1Q6P542 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Abcf1Q6P542 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Abcf1Q6P542 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Abcf1Q6P542 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Abcf1Q6P542 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Abcf1Q6P542 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Abcf1Q6P542 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Abcf1Q6P542 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Abcf1Q6P542 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Abcf1Q6P542 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Abcf1Q6P542 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Abcf1Q6P542 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Abcf1Q6P542 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.49■■□□□ 1.51
Abcf1Q6P542 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Abcf1Q6P542 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Abcf1Q6P542 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Abcf1Q6P542 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Abcf1Q6P542 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Abcf1Q6P542 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Abcf1Q6P542 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Abcf1Q6P542 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Abcf1Q6P542 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Abcf1Q6P542 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Abcf1Q6P542 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Abcf1Q6P542 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Abcf1Q6P542 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Abcf1Q6P542 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.46■■□□□ 1.51
Abcf1Q6P542 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.46■■□□□ 1.51
Abcf1Q6P542 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Abcf1Q6P542 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.46■■□□□ 1.51
Abcf1Q6P542 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Abcf1Q6P542 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Abcf1Q6P542 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Abcf1Q6P542 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Abcf1Q6P542 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Abcf1Q6P542 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.45■■□□□ 1.51
Abcf1Q6P542 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Abcf1Q6P542 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Abcf1Q6P542 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Abcf1Q6P542 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Abcf1Q6P542 Mir3960-201ENSMUST00000198213 73 ntBASIC24.44■■□□□ 1.5
Abcf1Q6P542 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Abcf1Q6P542 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Abcf1Q6P542 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Abcf1Q6P542 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.43■■□□□ 1.5
Abcf1Q6P542 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Abcf1Q6P542 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.43■■□□□ 1.5
Abcf1Q6P542 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.43■■□□□ 1.5
Abcf1Q6P542 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Abcf1Q6P542 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.42■■□□□ 1.5
Abcf1Q6P542 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms