Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Six4Q61321 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Six4Q61321 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Six4Q61321 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Six4Q61321 Gm7332-201ENSMUST00000118351 454 ntBASIC22.47■■□□□ 1.19
Six4Q61321 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.47■■□□□ 1.19
Six4Q61321 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Six4Q61321 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.46■■□□□ 1.19
Six4Q61321 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Six4Q61321 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Six4Q61321 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Six4Q61321 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Six4Q61321 Cap2-205ENSMUST00000225824 1634 ntBASIC22.46■■□□□ 1.19
Six4Q61321 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Six4Q61321 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Six4Q61321 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.45■■□□□ 1.18
Six4Q61321 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Six4Q61321 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Six4Q61321 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Six4Q61321 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.44■■□□□ 1.18
Six4Q61321 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.44■■□□□ 1.18
Six4Q61321 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Six4Q61321 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Six4Q61321 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Six4Q61321 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Six4Q61321 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.43■■□□□ 1.18
Six4Q61321 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Six4Q61321 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Six4Q61321 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Six4Q61321 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Six4Q61321 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.42■■□□□ 1.18
Six4Q61321 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.42■■□□□ 1.18
Six4Q61321 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Six4Q61321 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Six4Q61321 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Six4Q61321 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Six4Q61321 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.41■■□□□ 1.18
Six4Q61321 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Six4Q61321 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Six4Q61321 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Six4Q61321 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Six4Q61321 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.4■■□□□ 1.18
Six4Q61321 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Six4Q61321 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Six4Q61321 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Six4Q61321 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Six4Q61321 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.39■■□□□ 1.17
Six4Q61321 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Six4Q61321 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Six4Q61321 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Six4Q61321 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Six4Q61321 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Six4Q61321 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Six4Q61321 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Six4Q61321 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.38■■□□□ 1.17
Six4Q61321 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Six4Q61321 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Six4Q61321 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Six4Q61321 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Six4Q61321 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Six4Q61321 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Six4Q61321 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.37■■□□□ 1.17
Six4Q61321 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Six4Q61321 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Six4Q61321 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Six4Q61321 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Six4Q61321 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Six4Q61321 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Six4Q61321 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Six4Q61321 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Six4Q61321 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Six4Q61321 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Six4Q61321 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Six4Q61321 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.34■■□□□ 1.17
Six4Q61321 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Six4Q61321 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Six4Q61321 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Six4Q61321 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Six4Q61321 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Six4Q61321 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Six4Q61321 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Six4Q61321 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Six4Q61321 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Six4Q61321 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Six4Q61321 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Six4Q61321 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Six4Q61321 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Six4Q61321 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Six4Q61321 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.3■■□□□ 1.16
Six4Q61321 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Six4Q61321 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Six4Q61321 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Six4Q61321 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Six4Q61321 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Six4Q61321 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Six4Q61321 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Six4Q61321 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Six4Q61321 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Six4Q61321 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Six4Q61321 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms