Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Sdf4Q61112 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.39■■□□□ 1.17
Sdf4Q61112 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Sdf4Q61112 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sdf4Q61112 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sdf4Q61112 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sdf4Q61112 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.38■■□□□ 1.17
Sdf4Q61112 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.38■■□□□ 1.17
Sdf4Q61112 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sdf4Q61112 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sdf4Q61112 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
Sdf4Q61112 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sdf4Q61112 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sdf4Q61112 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sdf4Q61112 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sdf4Q61112 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sdf4Q61112 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Sdf4Q61112 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Sdf4Q61112 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sdf4Q61112 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sdf4Q61112 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sdf4Q61112 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.34■■□□□ 1.17
Sdf4Q61112 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sdf4Q61112 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sdf4Q61112 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sdf4Q61112 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sdf4Q61112 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sdf4Q61112 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sdf4Q61112 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.32■■□□□ 1.16
Sdf4Q61112 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Sdf4Q61112 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sdf4Q61112 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.31■■□□□ 1.16
Sdf4Q61112 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sdf4Q61112 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.3■■□□□ 1.16
Sdf4Q61112 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Sdf4Q61112 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Sdf4Q61112 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sdf4Q61112 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.29■■□□□ 1.16
Sdf4Q61112 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Sdf4Q61112 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Sdf4Q61112 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sdf4Q61112 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.28■■□□□ 1.16
Sdf4Q61112 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.28■■□□□ 1.16
Sdf4Q61112 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.28■■□□□ 1.16
Sdf4Q61112 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sdf4Q61112 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sdf4Q61112 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sdf4Q61112 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sdf4Q61112 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.27■■□□□ 1.16
Sdf4Q61112 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sdf4Q61112 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.27■■□□□ 1.16
Sdf4Q61112 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sdf4Q61112 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Sdf4Q61112 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Sdf4Q61112 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sdf4Q61112 Gm27502-201ENSMUST00000183495 199 ntBASIC22.26■■□□□ 1.15
Sdf4Q61112 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sdf4Q61112 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sdf4Q61112 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
Sdf4Q61112 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Sdf4Q61112 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.25■■□□□ 1.15
Sdf4Q61112 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sdf4Q61112 Gm14523-201ENSMUST00000117260 558 ntBASIC22.24■■□□□ 1.15
Sdf4Q61112 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Sdf4Q61112 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Sdf4Q61112 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sdf4Q61112 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Sdf4Q61112 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sdf4Q61112 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sdf4Q61112 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.23■■□□□ 1.15
Sdf4Q61112 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sdf4Q61112 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sdf4Q61112 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sdf4Q61112 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sdf4Q61112 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sdf4Q61112 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sdf4Q61112 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Sdf4Q61112 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sdf4Q61112 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sdf4Q61112 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Sdf4Q61112 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
Sdf4Q61112 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.2■■□□□ 1.14
Sdf4Q61112 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms