Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfaip3Q60769 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfaip3Q60769 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfaip3Q60769 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Tnfaip3Q60769 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfaip3Q60769 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tnfaip3Q60769 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfaip3Q60769 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfaip3Q60769 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfaip3Q60769 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfaip3Q60769 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfaip3Q60769 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfaip3Q60769 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfaip3Q60769 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfaip3Q60769 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.74■□□□□ 0.91
Tnfaip3Q60769 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfaip3Q60769 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfaip3Q60769 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfaip3Q60769 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfaip3Q60769 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfaip3Q60769 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfaip3Q60769 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfaip3Q60769 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.73■□□□□ 0.91
Tnfaip3Q60769 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tnfaip3Q60769 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfaip3Q60769 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tnfaip3Q60769 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfaip3Q60769 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.72■□□□□ 0.91
Tnfaip3Q60769 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfaip3Q60769 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Tnfaip3Q60769 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.7■□□□□ 0.9
Tnfaip3Q60769 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.7■□□□□ 0.9
Tnfaip3Q60769 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tnfaip3Q60769 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip3Q60769 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip3Q60769 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfaip3Q60769 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip3Q60769 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip3Q60769 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip3Q60769 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfaip3Q60769 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfaip3Q60769 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfaip3Q60769 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tnfaip3Q60769 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip3Q60769 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.67■□□□□ 0.9
Tnfaip3Q60769 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip3Q60769 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip3Q60769 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip3Q60769 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip3Q60769 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfaip3Q60769 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip3Q60769 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip3Q60769 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tnfaip3Q60769 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip3Q60769 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip3Q60769 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip3Q60769 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip3Q60769 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfaip3Q60769 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.65■□□□□ 0.9
Tnfaip3Q60769 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Tnfaip3Q60769 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnfaip3Q60769 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip3Q60769 Gm5921-201ENSMUST00000075898 882 ntBASIC20.64■□□□□ 0.89
Tnfaip3Q60769 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip3Q60769 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfaip3Q60769 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnfaip3Q60769 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfaip3Q60769 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfaip3Q60769 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfaip3Q60769 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfaip3Q60769 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfaip3Q60769 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.62■□□□□ 0.89
Tnfaip3Q60769 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfaip3Q60769 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.61■□□□□ 0.89
Tnfaip3Q60769 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.61■□□□□ 0.89
Tnfaip3Q60769 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnfaip3Q60769 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfaip3Q60769 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip3Q60769 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Tnfaip3Q60769 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip3Q60769 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip3Q60769 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfaip3Q60769 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfaip3Q60769 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms