Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-3Q5R1I1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7d-3Q5R1I1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7d-3Q5R1I1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav7d-3Q5R1I1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav7d-3Q5R1I1 Gm9812-201ENSMUST00000061934 968 ntBASIC16.12■□□□□ 0.17
Trav7d-3Q5R1I1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7d-3Q5R1I1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7d-3Q5R1I1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav7d-3Q5R1I1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 Mir3960-201ENSMUST00000198213 73 ntBASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav7d-3Q5R1I1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-3Q5R1I1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-3Q5R1I1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav7d-3Q5R1I1 Gm11599-201ENSMUST00000118720 878 ntBASIC16.1■□□□□ 0.17
Trav7d-3Q5R1I1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Trav7d-3Q5R1I1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-3Q5R1I1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-3Q5R1I1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-3Q5R1I1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-3Q5R1I1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-3Q5R1I1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-3Q5R1I1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav7d-3Q5R1I1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-3Q5R1I1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-3Q5R1I1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7d-3Q5R1I1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7d-3Q5R1I1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7d-3Q5R1I1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-3Q5R1I1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-3Q5R1I1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav7d-3Q5R1I1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-3Q5R1I1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-3Q5R1I1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-3Q5R1I1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-3Q5R1I1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Trav7d-3Q5R1I1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7d-3Q5R1I1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7d-3Q5R1I1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7d-3Q5R1I1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav7d-3Q5R1I1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7d-3Q5R1I1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7d-3Q5R1I1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav7d-3Q5R1I1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-3Q5R1I1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-3Q5R1I1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav7d-3Q5R1I1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav7d-3Q5R1I1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-3Q5R1I1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav7d-3Q5R1I1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.02■□□□□ 0.16
Trav7d-3Q5R1I1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7d-3Q5R1I1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav7d-3Q5R1I1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav7d-3Q5R1I1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav7d-3Q5R1I1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7d-3Q5R1I1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav7d-3Q5R1I1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trav7d-3Q5R1I1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav7d-3Q5R1I1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.01■□□□□ 0.15
Trav7d-3Q5R1I1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7d-3Q5R1I1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7d-3Q5R1I1 Terc-201ENSMUST00000082862 423 ntBASIC16.01■□□□□ 0.15
Trav7d-3Q5R1I1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7d-3Q5R1I1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms