Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.65■■□□□ 1.06
Rnf223Q3UV31 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.65■■□□□ 1.06
Rnf223Q3UV31 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf223Q3UV31 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf223Q3UV31 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf223Q3UV31 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf223Q3UV31 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Rnf223Q3UV31 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
Rnf223Q3UV31 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf223Q3UV31 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Rnf223Q3UV31 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf223Q3UV31 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf223Q3UV31 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rnf223Q3UV31 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf223Q3UV31 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf223Q3UV31 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf223Q3UV31 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf223Q3UV31 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf223Q3UV31 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf223Q3UV31 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.62■■□□□ 1.05
Rnf223Q3UV31 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.62■■□□□ 1.05
Rnf223Q3UV31 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rnf223Q3UV31 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf223Q3UV31 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf223Q3UV31 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.61■■□□□ 1.05
Rnf223Q3UV31 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf223Q3UV31 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf223Q3UV31 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf223Q3UV31 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf223Q3UV31 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf223Q3UV31 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf223Q3UV31 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf223Q3UV31 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf223Q3UV31 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf223Q3UV31 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf223Q3UV31 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.57■■□□□ 1.04
Rnf223Q3UV31 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.57■■□□□ 1.04
Rnf223Q3UV31 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf223Q3UV31 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf223Q3UV31 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf223Q3UV31 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf223Q3UV31 Gm13238-201ENSMUST00000117655 780 ntBASIC21.56■■□□□ 1.04
Rnf223Q3UV31 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rnf223Q3UV31 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rnf223Q3UV31 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf223Q3UV31 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.55■■□□□ 1.04
Rnf223Q3UV31 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.55■■□□□ 1.04
Rnf223Q3UV31 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.55■■□□□ 1.04
Rnf223Q3UV31 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Rnf223Q3UV31 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Rnf223Q3UV31 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Rnf223Q3UV31 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf223Q3UV31 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf223Q3UV31 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf223Q3UV31 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf223Q3UV31 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.54■■□□□ 1.04
Rnf223Q3UV31 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf223Q3UV31 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf223Q3UV31 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf223Q3UV31 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf223Q3UV31 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rnf223Q3UV31 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Rnf223Q3UV31 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf223Q3UV31 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Gm5812-201ENSMUST00000061073 957 ntBASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf223Q3UV31 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf223Q3UV31 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Rnf223Q3UV31 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf223Q3UV31 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf223Q3UV31 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rnf223Q3UV31 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf223Q3UV31 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf223Q3UV31 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rnf223Q3UV31 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.49■■□□□ 1.03
Rnf223Q3UV31 Gm45444-201ENSMUST00000211394 898 ntBASIC21.49■■□□□ 1.03
Rnf223Q3UV31 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf223Q3UV31 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Rnf223Q3UV31 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf223Q3UV31 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf223Q3UV31 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf223Q3UV31 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf223Q3UV31 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms