Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.99■□□□□ 0.47
Znf48Q3US17 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Znf48Q3US17 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Znf48Q3US17 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Znf48Q3US17 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Znf48Q3US17 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Znf48Q3US17 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Znf48Q3US17 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Znf48Q3US17 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Znf48Q3US17 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Znf48Q3US17 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Znf48Q3US17 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.98■□□□□ 0.47
Znf48Q3US17 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.98■□□□□ 0.47
Znf48Q3US17 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Znf48Q3US17 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.98■□□□□ 0.47
Znf48Q3US17 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Znf48Q3US17 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Znf48Q3US17 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Znf48Q3US17 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Znf48Q3US17 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Znf48Q3US17 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Znf48Q3US17 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Znf48Q3US17 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Znf48Q3US17 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Znf48Q3US17 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Znf48Q3US17 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Znf48Q3US17 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Znf48Q3US17 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Znf48Q3US17 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Znf48Q3US17 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
Znf48Q3US17 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.95■□□□□ 0.46
Znf48Q3US17 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.95■□□□□ 0.46
Znf48Q3US17 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Znf48Q3US17 Gm9812-201ENSMUST00000061934 968 ntBASIC17.95■□□□□ 0.46
Znf48Q3US17 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Znf48Q3US17 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Znf48Q3US17 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Znf48Q3US17 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.93■□□□□ 0.46
Znf48Q3US17 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.93■□□□□ 0.46
Znf48Q3US17 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Znf48Q3US17 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Znf48Q3US17 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Znf48Q3US17 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Znf48Q3US17 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Znf48Q3US17 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Znf48Q3US17 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Znf48Q3US17 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Znf48Q3US17 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Znf48Q3US17 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Znf48Q3US17 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Znf48Q3US17 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Znf48Q3US17 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Znf48Q3US17 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Znf48Q3US17 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Znf48Q3US17 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.9■□□□□ 0.46
Znf48Q3US17 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Znf48Q3US17 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Znf48Q3US17 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.9■□□□□ 0.46
Znf48Q3US17 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Znf48Q3US17 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.9■□□□□ 0.46
Znf48Q3US17 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.9■□□□□ 0.46
Znf48Q3US17 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Znf48Q3US17 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Znf48Q3US17 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Znf48Q3US17 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Znf48Q3US17 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Znf48Q3US17 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Znf48Q3US17 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.89■□□□□ 0.45
Znf48Q3US17 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Znf48Q3US17 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Znf48Q3US17 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Znf48Q3US17 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Znf48Q3US17 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Znf48Q3US17 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Znf48Q3US17 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.88■□□□□ 0.45
Znf48Q3US17 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Znf48Q3US17 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Znf48Q3US17 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.88■□□□□ 0.45
Znf48Q3US17 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.88■□□□□ 0.45
Znf48Q3US17 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Znf48Q3US17 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Znf48Q3US17 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Znf48Q3US17 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Znf48Q3US17 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Znf48Q3US17 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Znf48Q3US17 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Znf48Q3US17 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Znf48Q3US17 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Znf48Q3US17 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Znf48Q3US17 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Znf48Q3US17 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Znf48Q3US17 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Znf48Q3US17 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Znf48Q3US17 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Znf48Q3US17 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Znf48Q3US17 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Znf48Q3US17 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Znf48Q3US17 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Znf48Q3US17 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Znf48Q3US17 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms