Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
Rnf149Q3U2C5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.77■□□□□ 0.76
Rnf149Q3U2C5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf149Q3U2C5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rnf149Q3U2C5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf149Q3U2C5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf149Q3U2C5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf149Q3U2C5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.76■□□□□ 0.75
Rnf149Q3U2C5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf149Q3U2C5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf149Q3U2C5 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.76■□□□□ 0.75
Rnf149Q3U2C5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf149Q3U2C5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf149Q3U2C5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
Rnf149Q3U2C5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf149Q3U2C5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf149Q3U2C5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf149Q3U2C5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf149Q3U2C5 Gm11599-201ENSMUST00000118720 878 ntBASIC19.74■□□□□ 0.75
Rnf149Q3U2C5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf149Q3U2C5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.74■□□□□ 0.75
Rnf149Q3U2C5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf149Q3U2C5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf149Q3U2C5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf149Q3U2C5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf149Q3U2C5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf149Q3U2C5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Rnf149Q3U2C5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.72■□□□□ 0.75
Rnf149Q3U2C5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf149Q3U2C5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf149Q3U2C5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf149Q3U2C5 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.71■□□□□ 0.75
Rnf149Q3U2C5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf149Q3U2C5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf149Q3U2C5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf149Q3U2C5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf149Q3U2C5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf149Q3U2C5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf149Q3U2C5 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.7■□□□□ 0.74
Rnf149Q3U2C5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf149Q3U2C5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rnf149Q3U2C5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rnf149Q3U2C5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf149Q3U2C5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.69■□□□□ 0.74
Rnf149Q3U2C5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf149Q3U2C5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf149Q3U2C5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf149Q3U2C5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf149Q3U2C5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf149Q3U2C5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf149Q3U2C5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf149Q3U2C5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rnf149Q3U2C5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf149Q3U2C5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf149Q3U2C5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf149Q3U2C5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf149Q3U2C5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf149Q3U2C5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf149Q3U2C5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rnf149Q3U2C5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf149Q3U2C5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Rnf149Q3U2C5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Rnf149Q3U2C5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf149Q3U2C5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf149Q3U2C5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf149Q3U2C5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf149Q3U2C5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf149Q3U2C5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf149Q3U2C5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf149Q3U2C5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf149Q3U2C5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf149Q3U2C5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf149Q3U2C5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf149Q3U2C5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf149Q3U2C5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf149Q3U2C5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf149Q3U2C5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf149Q3U2C5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf149Q3U2C5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf149Q3U2C5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf149Q3U2C5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms