Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lhx1P63006 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lhx1P63006 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lhx1P63006 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lhx1P63006 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lhx1P63006 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.82■■□□□ 1.08
Lhx1P63006 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lhx1P63006 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lhx1P63006 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lhx1P63006 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lhx1P63006 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Lhx1P63006 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.81■■□□□ 1.08
Lhx1P63006 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lhx1P63006 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lhx1P63006 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lhx1P63006 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lhx1P63006 Gm5921-201ENSMUST00000075898 882 ntBASIC21.81■■□□□ 1.08
Lhx1P63006 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lhx1P63006 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lhx1P63006 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lhx1P63006 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lhx1P63006 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Lhx1P63006 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lhx1P63006 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lhx1P63006 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.79■■□□□ 1.08
Lhx1P63006 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lhx1P63006 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lhx1P63006 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lhx1P63006 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lhx1P63006 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Lhx1P63006 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.77■■□□□ 1.08
Lhx1P63006 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.77■■□□□ 1.08
Lhx1P63006 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lhx1P63006 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lhx1P63006 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Lhx1P63006 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Lhx1P63006 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx1P63006 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx1P63006 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lhx1P63006 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Lhx1P63006 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx1P63006 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.75■■□□□ 1.07
Lhx1P63006 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx1P63006 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx1P63006 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx1P63006 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Lhx1P63006 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lhx1P63006 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx1P63006 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx1P63006 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx1P63006 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lhx1P63006 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Lhx1P63006 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lhx1P63006 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lhx1P63006 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx1P63006 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx1P63006 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.72■■□□□ 1.07
Lhx1P63006 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx1P63006 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lhx1P63006 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Lhx1P63006 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx1P63006 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx1P63006 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx1P63006 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Lhx1P63006 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx1P63006 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx1P63006 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx1P63006 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lhx1P63006 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.7■■□□□ 1.07
Lhx1P63006 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.7■■□□□ 1.06
Lhx1P63006 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lhx1P63006 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.7■■□□□ 1.06
Lhx1P63006 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Lhx1P63006 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.69■■□□□ 1.06
Lhx1P63006 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx1P63006 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx1P63006 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx1P63006 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lhx1P63006 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lhx1P63006 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.68■■□□□ 1.06
Lhx1P63006 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lhx1P63006 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lhx1P63006 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lhx1P63006 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.67■■□□□ 1.06
Lhx1P63006 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.67■■□□□ 1.06
Lhx1P63006 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lhx1P63006 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lhx1P63006 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lhx1P63006 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.66■■□□□ 1.06
Lhx1P63006 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.66■■□□□ 1.06
Lhx1P63006 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lhx1P63006 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.65■■□□□ 1.06
Lhx1P63006 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.65■■□□□ 1.06
Lhx1P63006 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lhx1P63006 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.64■■□□□ 1.05
Lhx1P63006 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.64■■□□□ 1.05
Lhx1P63006 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Lhx1P63006 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lhx1P63006 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lhx1P63006 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms