Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a3P56564 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a3P56564 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a3P56564 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a3P56564 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.79■□□□□ 0.76
Slc1a3P56564 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a3P56564 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a3P56564 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a3P56564 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a3P56564 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.78■□□□□ 0.76
Slc1a3P56564 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.78■□□□□ 0.76
Slc1a3P56564 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc1a3P56564 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc1a3P56564 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc1a3P56564 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc1a3P56564 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc1a3P56564 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc1a3P56564 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc1a3P56564 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a3P56564 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a3P56564 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a3P56564 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc1a3P56564 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Slc1a3P56564 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a3P56564 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.76■□□□□ 0.75
Slc1a3P56564 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a3P56564 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a3P56564 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a3P56564 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc1a3P56564 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc1a3P56564 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Slc1a3P56564 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc1a3P56564 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a3P56564 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.74■□□□□ 0.75
Slc1a3P56564 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a3P56564 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc1a3P56564 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc1a3P56564 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a3P56564 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.72■□□□□ 0.75
Slc1a3P56564 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a3P56564 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a3P56564 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc1a3P56564 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Slc1a3P56564 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Slc1a3P56564 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.71■□□□□ 0.75
Slc1a3P56564 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.71■□□□□ 0.75
Slc1a3P56564 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.71■□□□□ 0.75
Slc1a3P56564 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.71■□□□□ 0.75
Slc1a3P56564 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc1a3P56564 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.7■□□□□ 0.74
Slc1a3P56564 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a3P56564 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a3P56564 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a3P56564 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a3P56564 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a3P56564 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a3P56564 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc1a3P56564 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slc1a3P56564 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Slc1a3P56564 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.69■□□□□ 0.74
Slc1a3P56564 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a3P56564 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Slc1a3P56564 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a3P56564 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc1a3P56564 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a3P56564 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a3P56564 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a3P56564 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a3P56564 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a3P56564 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a3P56564 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc1a3P56564 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc1a3P56564 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a3P56564 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a3P56564 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a3P56564 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a3P56564 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc1a3P56564 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Slc1a3P56564 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a3P56564 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a3P56564 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.65■□□□□ 0.74
Slc1a3P56564 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a3P56564 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Slc1a3P56564 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a3P56564 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a3P56564 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a3P56564 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a3P56564 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc1a3P56564 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.64■□□□□ 0.73
Slc1a3P56564 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc1a3P56564 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc1a3P56564 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc1a3P56564 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc1a3P56564 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc1a3P56564 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc1a3P56564 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.62■□□□□ 0.73
Slc1a3P56564 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Slc1a3P56564 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a3P56564 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a3P56564 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms