Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.67■□□□□ 0.9
Sox2P48432 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.67■□□□□ 0.9
Sox2P48432 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Sox2P48432 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.67■□□□□ 0.9
Sox2P48432 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sox2P48432 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox2P48432 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox2P48432 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox2P48432 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.66■□□□□ 0.9
Sox2P48432 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox2P48432 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox2P48432 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Sox2P48432 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox2P48432 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sox2P48432 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox2P48432 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Sox2P48432 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.64■□□□□ 0.89
Sox2P48432 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sox2P48432 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox2P48432 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox2P48432 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox2P48432 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.64■□□□□ 0.89
Sox2P48432 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox2P48432 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox2P48432 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.63■□□□□ 0.89
Sox2P48432 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox2P48432 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox2P48432 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Sox2P48432 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox2P48432 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox2P48432 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sox2P48432 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox2P48432 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.61■□□□□ 0.89
Sox2P48432 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.61■□□□□ 0.89
Sox2P48432 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox2P48432 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sox2P48432 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.61■□□□□ 0.89
Sox2P48432 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox2P48432 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox2P48432 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.6■□□□□ 0.89
Sox2P48432 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Sox2P48432 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox2P48432 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox2P48432 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox2P48432 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.59■□□□□ 0.89
Sox2P48432 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox2P48432 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox2P48432 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Sox2P48432 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.59■□□□□ 0.89
Sox2P48432 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox2P48432 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sox2P48432 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sox2P48432 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox2P48432 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Sox2P48432 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Sox2P48432 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.58■□□□□ 0.88
Sox2P48432 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox2P48432 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox2P48432 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox2P48432 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sox2P48432 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sox2P48432 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox2P48432 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sox2P48432 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox2P48432 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox2P48432 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox2P48432 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox2P48432 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Sox2P48432 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sox2P48432 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox2P48432 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.55■□□□□ 0.88
Sox2P48432 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox2P48432 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox2P48432 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox2P48432 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox2P48432 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.54■□□□□ 0.88
Sox2P48432 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox2P48432 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox2P48432 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox2P48432 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox2P48432 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Sox2P48432 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.53■□□□□ 0.88
Sox2P48432 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sox2P48432 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Sox2P48432 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox2P48432 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sox2P48432 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox2P48432 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox2P48432 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sox2P48432 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox2P48432 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox2P48432 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox2P48432 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox2P48432 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox2P48432 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox2P48432 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox2P48432 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.5■□□□□ 0.87
Sox2P48432 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox2P48432 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.5■□□□□ 0.87
Sox2P48432 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms