Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cd27P41272 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cd27P41272 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.85■□□□□ 0.45
Cd27P41272 Gm5786-201ENSMUST00000085368 882 ntBASIC17.85■□□□□ 0.45
Cd27P41272 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd27P41272 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd27P41272 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd27P41272 Gm14523-201ENSMUST00000117260 558 ntBASIC17.84■□□□□ 0.45
Cd27P41272 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cd27P41272 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd27P41272 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cd27P41272 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cd27P41272 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.83■□□□□ 0.44
Cd27P41272 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.83■□□□□ 0.44
Cd27P41272 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd27P41272 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cd27P41272 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cd27P41272 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd27P41272 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd27P41272 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd27P41272 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd27P41272 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd27P41272 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd27P41272 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.81■□□□□ 0.44
Cd27P41272 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd27P41272 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cd27P41272 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd27P41272 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd27P41272 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd27P41272 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd27P41272 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd27P41272 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd27P41272 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd27P41272 Cap2-205ENSMUST00000225824 1634 ntBASIC17.8■□□□□ 0.44
Cd27P41272 Gm7332-201ENSMUST00000118351 454 ntBASIC17.79■□□□□ 0.44
Cd27P41272 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd27P41272 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd27P41272 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd27P41272 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd27P41272 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd27P41272 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cd27P41272 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd27P41272 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd27P41272 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd27P41272 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd27P41272 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd27P41272 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cd27P41272 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd27P41272 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cd27P41272 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cd27P41272 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cd27P41272 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cd27P41272 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd27P41272 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Cd27P41272 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd27P41272 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.77■□□□□ 0.44
Cd27P41272 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd27P41272 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd27P41272 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.77■□□□□ 0.44
Cd27P41272 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.76■□□□□ 0.43
Cd27P41272 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd27P41272 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cd27P41272 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd27P41272 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.75■□□□□ 0.43
Cd27P41272 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.75■□□□□ 0.43
Cd27P41272 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd27P41272 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd27P41272 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd27P41272 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd27P41272 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd27P41272 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.74■□□□□ 0.43
Cd27P41272 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd27P41272 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd27P41272 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd27P41272 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cd27P41272 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd27P41272 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.74■□□□□ 0.43
Cd27P41272 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.74■□□□□ 0.43
Cd27P41272 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd27P41272 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.73■□□□□ 0.43
Cd27P41272 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd27P41272 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd27P41272 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cd27P41272 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd27P41272 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd27P41272 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.72■□□□□ 0.43
Cd27P41272 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd27P41272 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd27P41272 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cd27P41272 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd27P41272 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.71■□□□□ 0.43
Cd27P41272 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd27P41272 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd27P41272 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cd27P41272 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cd27P41272 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd27P41272 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd27P41272 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd27P41272 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd27P41272 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms