Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tuba1bP05213 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tuba1bP05213 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.37■□□□□ 0.85
Tuba1bP05213 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tuba1bP05213 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tuba1bP05213 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tuba1bP05213 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.36■□□□□ 0.85
Tuba1bP05213 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.36■□□□□ 0.85
Tuba1bP05213 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tuba1bP05213 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tuba1bP05213 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Tuba1bP05213 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tuba1bP05213 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tuba1bP05213 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tuba1bP05213 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tuba1bP05213 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tuba1bP05213 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tuba1bP05213 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tuba1bP05213 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.34■□□□□ 0.85
Tuba1bP05213 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tuba1bP05213 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tuba1bP05213 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.34■□□□□ 0.85
Tuba1bP05213 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tuba1bP05213 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tuba1bP05213 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.33■□□□□ 0.85
Tuba1bP05213 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tuba1bP05213 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tuba1bP05213 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tuba1bP05213 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tuba1bP05213 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tuba1bP05213 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Tuba1bP05213 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tuba1bP05213 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tuba1bP05213 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tuba1bP05213 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tuba1bP05213 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tuba1bP05213 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tuba1bP05213 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tuba1bP05213 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tuba1bP05213 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tuba1bP05213 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tuba1bP05213 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tuba1bP05213 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tuba1bP05213 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tuba1bP05213 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.3■□□□□ 0.84
Tuba1bP05213 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tuba1bP05213 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Tuba1bP05213 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.3■□□□□ 0.84
Tuba1bP05213 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tuba1bP05213 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tuba1bP05213 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tuba1bP05213 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.29■□□□□ 0.84
Tuba1bP05213 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tuba1bP05213 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tuba1bP05213 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tuba1bP05213 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tuba1bP05213 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tuba1bP05213 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tuba1bP05213 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tuba1bP05213 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tuba1bP05213 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tuba1bP05213 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tuba1bP05213 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tuba1bP05213 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tuba1bP05213 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.27■□□□□ 0.83
Tuba1bP05213 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tuba1bP05213 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tuba1bP05213 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tuba1bP05213 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tuba1bP05213 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tuba1bP05213 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tuba1bP05213 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Tuba1bP05213 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Gm37136-201ENSMUST00000194368 194 ntBASIC20.25■□□□□ 0.83
Tuba1bP05213 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tuba1bP05213 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tuba1bP05213 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tuba1bP05213 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tuba1bP05213 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tuba1bP05213 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tuba1bP05213 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Tuba1bP05213 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tuba1bP05213 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tuba1bP05213 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tuba1bP05213 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tuba1bP05213 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tuba1bP05213 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tuba1bP05213 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tuba1bP05213 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tuba1bP05213 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.22■□□□□ 0.83
Tuba1bP05213 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tuba1bP05213 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms