Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01808 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01808 Gm14523-201ENSMUST00000117260 558 ntBASIC20.09■□□□□ 0.81
P01808 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.09■□□□□ 0.81
P01808 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01808 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01808 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01808 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.08■□□□□ 0.81
P01808 Gm12366-201ENSMUST00000121722 873 ntBASIC20.08■□□□□ 0.81
P01808 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.08■□□□□ 0.81
P01808 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.08■□□□□ 0.81
P01808 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01808 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.08■□□□□ 0.81
P01808 Gm5786-201ENSMUST00000085368 882 ntBASIC20.08■□□□□ 0.81
P01808 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01808 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
P01808 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.07■□□□□ 0.8
P01808 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.07■□□□□ 0.8
P01808 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.07■□□□□ 0.8
P01808 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
P01808 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
P01808 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01808 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01808 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01808 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
P01808 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.06■□□□□ 0.8
P01808 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01808 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01808 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01808 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
P01808 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01808 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01808 Gm7332-201ENSMUST00000118351 454 ntBASIC20.05■□□□□ 0.8
P01808 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01808 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01808 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.05■□□□□ 0.8
P01808 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01808 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01808 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
P01808 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01808 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01808 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01808 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01808 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01808 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
P01808 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
P01808 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01808 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
P01808 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
P01808 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.03■□□□□ 0.8
P01808 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.03■□□□□ 0.8
P01808 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01808 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P01808 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.02■□□□□ 0.8
P01808 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.02■□□□□ 0.8
P01808 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P01808 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P01808 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
P01808 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
P01808 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
P01808 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.01■□□□□ 0.79
P01808 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
P01808 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P01808 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P01808 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P01808 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01808 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01808 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01808 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01808 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
P01808 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P01808 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20■□□□□ 0.79
P01808 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P01808 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01808 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.99■□□□□ 0.79
P01808 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.99■□□□□ 0.79
P01808 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.98■□□□□ 0.79
P01808 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01808 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
P01808 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01808 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01808 Cap2-205ENSMUST00000225824 1634 ntBASIC19.98■□□□□ 0.79
P01808 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01808 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01808 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
P01808 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01808 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01808 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
P01808 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01808 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01808 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P01808 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
P01808 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01808 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01808 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
P01808 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.95■□□□□ 0.78
P01808 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P01808 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P01808 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P01808 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms