Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops3O88543 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cops3O88543 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.71■□□□□ 0.75
Cops3O88543 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cops3O88543 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cops3O88543 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
Cops3O88543 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops3O88543 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops3O88543 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Cops3O88543 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops3O88543 Gm8503-201ENSMUST00000118131 455 ntBASIC19.69■□□□□ 0.74
Cops3O88543 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cops3O88543 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cops3O88543 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Cops3O88543 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cops3O88543 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cops3O88543 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cops3O88543 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.68■□□□□ 0.74
Cops3O88543 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cops3O88543 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.67■□□□□ 0.74
Cops3O88543 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops3O88543 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops3O88543 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops3O88543 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.66■□□□□ 0.74
Cops3O88543 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.66■□□□□ 0.74
Cops3O88543 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cops3O88543 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cops3O88543 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.65■□□□□ 0.74
Cops3O88543 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.65■□□□□ 0.74
Cops3O88543 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.65■□□□□ 0.74
Cops3O88543 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops3O88543 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cops3O88543 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
Cops3O88543 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cops3O88543 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cops3O88543 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cops3O88543 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cops3O88543 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops3O88543 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cops3O88543 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cops3O88543 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cops3O88543 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops3O88543 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cops3O88543 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops3O88543 Gm4799-201ENSMUST00000095396 657 ntBASIC19.63■□□□□ 0.73
Cops3O88543 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops3O88543 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops3O88543 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Cops3O88543 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops3O88543 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops3O88543 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cops3O88543 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.61■□□□□ 0.73
Cops3O88543 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops3O88543 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cops3O88543 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops3O88543 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cops3O88543 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops3O88543 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.6■□□□□ 0.73
Cops3O88543 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cops3O88543 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cops3O88543 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cops3O88543 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops3O88543 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops3O88543 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops3O88543 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cops3O88543 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.59■□□□□ 0.73
Cops3O88543 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.59■□□□□ 0.73
Cops3O88543 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cops3O88543 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.58■□□□□ 0.73
Cops3O88543 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cops3O88543 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cops3O88543 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Cops3O88543 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.58■□□□□ 0.72
Cops3O88543 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops3O88543 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops3O88543 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.58■□□□□ 0.72
Cops3O88543 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.58■□□□□ 0.72
Cops3O88543 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cops3O88543 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops3O88543 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cops3O88543 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops3O88543 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops3O88543 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops3O88543 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cops3O88543 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cops3O88543 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops3O88543 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cops3O88543 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Cops3O88543 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops3O88543 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cops3O88543 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.56■□□□□ 0.72
Cops3O88543 Gm9812-201ENSMUST00000061934 968 ntBASIC19.56■□□□□ 0.72
Cops3O88543 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cops3O88543 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.56■□□□□ 0.72
Cops3O88543 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cops3O88543 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops3O88543 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cops3O88543 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.55■□□□□ 0.72
Cops3O88543 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cops3O88543 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms