Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn2O70591 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pfdn2O70591 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Pfdn2O70591 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn2O70591 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn2O70591 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn2O70591 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn2O70591 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn2O70591 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn2O70591 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn2O70591 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn2O70591 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn2O70591 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Pfdn2O70591 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Pfdn2O70591 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.2■□□□□ 0.5
Pfdn2O70591 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.2■□□□□ 0.5
Pfdn2O70591 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn2O70591 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn2O70591 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn2O70591 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn2O70591 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn2O70591 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn2O70591 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn2O70591 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn2O70591 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn2O70591 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn2O70591 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn2O70591 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.18■□□□□ 0.5
Pfdn2O70591 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Pfdn2O70591 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pfdn2O70591 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pfdn2O70591 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn2O70591 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfdn2O70591 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfdn2O70591 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pfdn2O70591 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn2O70591 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pfdn2O70591 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn2O70591 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn2O70591 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pfdn2O70591 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pfdn2O70591 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Pfdn2O70591 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pfdn2O70591 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pfdn2O70591 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn2O70591 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn2O70591 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn2O70591 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Pfdn2O70591 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn2O70591 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn2O70591 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn2O70591 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn2O70591 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pfdn2O70591 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.13■□□□□ 0.49
Pfdn2O70591 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pfdn2O70591 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pfdn2O70591 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn2O70591 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn2O70591 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pfdn2O70591 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.12■□□□□ 0.49
Pfdn2O70591 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pfdn2O70591 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pfdn2O70591 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn2O70591 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn2O70591 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pfdn2O70591 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pfdn2O70591 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Pfdn2O70591 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.1■□□□□ 0.49
Pfdn2O70591 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn2O70591 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pfdn2O70591 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pfdn2O70591 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.09■□□□□ 0.49
Pfdn2O70591 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn2O70591 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn2O70591 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn2O70591 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn2O70591 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn2O70591 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pfdn2O70591 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Pfdn2O70591 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pfdn2O70591 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pfdn2O70591 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pfdn2O70591 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pfdn2O70591 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pfdn2O70591 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pfdn2O70591 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Pfdn2O70591 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pfdn2O70591 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pfdn2O70591 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms