Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf13O54965 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf13O54965 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf13O54965 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf13O54965 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf13O54965 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf13O54965 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf13O54965 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rnf13O54965 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf13O54965 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.95■□□□□ 0.78
Rnf13O54965 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rnf13O54965 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.95■□□□□ 0.78
Rnf13O54965 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.95■□□□□ 0.78
Rnf13O54965 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf13O54965 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf13O54965 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf13O54965 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.94■□□□□ 0.78
Rnf13O54965 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf13O54965 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rnf13O54965 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf13O54965 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf13O54965 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.94■□□□□ 0.78
Rnf13O54965 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf13O54965 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rnf13O54965 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf13O54965 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf13O54965 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.93■□□□□ 0.78
Rnf13O54965 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.93■□□□□ 0.78
Rnf13O54965 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.93■□□□□ 0.78
Rnf13O54965 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf13O54965 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf13O54965 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf13O54965 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf13O54965 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf13O54965 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf13O54965 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf13O54965 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf13O54965 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.91■□□□□ 0.78
Rnf13O54965 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.91■□□□□ 0.78
Rnf13O54965 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf13O54965 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf13O54965 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf13O54965 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf13O54965 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf13O54965 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf13O54965 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf13O54965 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf13O54965 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf13O54965 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rnf13O54965 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf13O54965 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf13O54965 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf13O54965 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf13O54965 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf13O54965 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rnf13O54965 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf13O54965 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rnf13O54965 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf13O54965 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.87■□□□□ 0.77
Rnf13O54965 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Rnf13O54965 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rnf13O54965 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf13O54965 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rnf13O54965 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf13O54965 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf13O54965 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf13O54965 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.86■□□□□ 0.77
Rnf13O54965 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.86■□□□□ 0.77
Rnf13O54965 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf13O54965 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf13O54965 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rnf13O54965 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf13O54965 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf13O54965 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf13O54965 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf13O54965 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf13O54965 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf13O54965 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rnf13O54965 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.84■□□□□ 0.77
Rnf13O54965 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf13O54965 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf13O54965 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf13O54965 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.83■□□□□ 0.77
Rnf13O54965 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf13O54965 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf13O54965 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf13O54965 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf13O54965 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf13O54965 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.83■□□□□ 0.77
Rnf13O54965 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf13O54965 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Rnf13O54965 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf13O54965 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf13O54965 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf13O54965 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf13O54965 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf13O54965 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf13O54965 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf13O54965 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf13O54965 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms