Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
ClockO08785 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ClockO08785 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ClockO08785 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.94■□□□□ 0.94
ClockO08785 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ClockO08785 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ClockO08785 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.94■□□□□ 0.94
ClockO08785 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClockO08785 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ClockO08785 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ClockO08785 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.92■□□□□ 0.94
ClockO08785 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClockO08785 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClockO08785 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ClockO08785 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ClockO08785 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ClockO08785 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ClockO08785 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ClockO08785 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.91■□□□□ 0.94
ClockO08785 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClockO08785 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClockO08785 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ClockO08785 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ClockO08785 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.9■□□□□ 0.94
ClockO08785 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
ClockO08785 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
ClockO08785 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ClockO08785 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ClockO08785 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ClockO08785 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ClockO08785 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ClockO08785 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
ClockO08785 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClockO08785 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ClockO08785 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClockO08785 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClockO08785 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ClockO08785 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClockO08785 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.87■□□□□ 0.93
ClockO08785 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClockO08785 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ClockO08785 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ClockO08785 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ClockO08785 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClockO08785 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClockO08785 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ClockO08785 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ClockO08785 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ClockO08785 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ClockO08785 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClockO08785 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClockO08785 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClockO08785 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ClockO08785 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClockO08785 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClockO08785 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ClockO08785 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.84■□□□□ 0.93
ClockO08785 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.84■□□□□ 0.93
ClockO08785 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ClockO08785 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.83■□□□□ 0.93
ClockO08785 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ClockO08785 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ClockO08785 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.83■□□□□ 0.92
ClockO08785 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
ClockO08785 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
ClockO08785 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ClockO08785 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClockO08785 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClockO08785 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClockO08785 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ClockO08785 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ClockO08785 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.81■□□□□ 0.92
ClockO08785 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
ClockO08785 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ClockO08785 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ClockO08785 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ClockO08785 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClockO08785 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
ClockO08785 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.79■□□□□ 0.92
ClockO08785 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClockO08785 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ClockO08785 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ClockO08785 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ClockO08785 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ClockO08785 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.78■□□□□ 0.92
ClockO08785 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ClockO08785 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ClockO08785 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ClockO08785 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClockO08785 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ClockO08785 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClockO08785 Gm37136-201ENSMUST00000194368 194 ntBASIC20.77■□□□□ 0.92
ClockO08785 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ClockO08785 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClockO08785 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClockO08785 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ClockO08785 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClockO08785 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClockO08785 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClockO08785 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 146.7 ms