Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.82■■□□□ 1.4
Ube3aO08759 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.82■■□□□ 1.4
Ube3aO08759 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube3aO08759 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube3aO08759 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube3aO08759 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3aO08759 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3aO08759 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3aO08759 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3aO08759 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube3aO08759 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3aO08759 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Ube3aO08759 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.8■■□□□ 1.4
Ube3aO08759 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube3aO08759 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube3aO08759 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Ube3aO08759 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Ube3aO08759 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3aO08759 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3aO08759 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3aO08759 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3aO08759 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.78■■□□□ 1.4
Ube3aO08759 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3aO08759 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube3aO08759 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Ube3aO08759 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.77■■□□□ 1.4
Ube3aO08759 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube3aO08759 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ube3aO08759 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ube3aO08759 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ube3aO08759 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ube3aO08759 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3aO08759 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3aO08759 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.75■■□□□ 1.39
Ube3aO08759 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube3aO08759 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube3aO08759 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.74■■□□□ 1.39
Ube3aO08759 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ube3aO08759 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube3aO08759 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ube3aO08759 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.73■■□□□ 1.39
Ube3aO08759 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ube3aO08759 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.72■■□□□ 1.39
Ube3aO08759 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.72■■□□□ 1.39
Ube3aO08759 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ube3aO08759 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ube3aO08759 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube3aO08759 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ube3aO08759 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.7■■□□□ 1.38
Ube3aO08759 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ube3aO08759 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.7■■□□□ 1.38
Ube3aO08759 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Ube3aO08759 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.69■■□□□ 1.38
Ube3aO08759 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ube3aO08759 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ube3aO08759 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.68■■□□□ 1.38
Ube3aO08759 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ube3aO08759 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ube3aO08759 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ube3aO08759 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ube3aO08759 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Ube3aO08759 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Ube3aO08759 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ube3aO08759 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ube3aO08759 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ube3aO08759 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ube3aO08759 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.66■■□□□ 1.38
Ube3aO08759 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ube3aO08759 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.66■■□□□ 1.38
Ube3aO08759 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ube3aO08759 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
Ube3aO08759 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ube3aO08759 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ube3aO08759 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ube3aO08759 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ube3aO08759 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.65■■□□□ 1.38
Ube3aO08759 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.65■■□□□ 1.38
Ube3aO08759 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.65■■□□□ 1.38
Ube3aO08759 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ube3aO08759 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ube3aO08759 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Ube3aO08759 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ube3aO08759 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ube3aO08759 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
Ube3aO08759 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ube3aO08759 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ube3aO08759 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ube3aO08759 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.64■■□□□ 1.37
Ube3aO08759 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ube3aO08759 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ube3aO08759 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms